Coregonus clupeaformis (lake whitefish): 121543416
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Entry
121543416 CDS
T08357
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
121543416
NCBI-ProteinID:
XP_041709199
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All DBs
Position
28:complement(24557025..24835021)
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AA seq
960 aa
AA seq
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MHGTVCFRYSVCSQLSSLFLLGFNRTVISDSRLLTCFPLNGVSNFVDMASSVSAQANPAP
VAALQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRTGVLARRAPQSQPDQKDTPD
EPYAFQAREFLRKILVGKEVCFTVEVKTALGREYGMVYLGRDTTGENIAECLVNEGLATV
RREGIRGNNPDQARLCDLEDQAKASKKGMWTEGGGTNTVRDLKYSIENPRNFVDSMHQKP
VNAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTESPEPFAAEAKFFTES
RLLQRDVQIILESCPNQVILGTILHPNGNITELLLKEGFARCVDWSMAVYTQGAEKLRAG
EKSAKERKVRIWKDYVAPTANMDQKDRQFVAKVMQVVNADAIVVKLNSGEYKTIHLSSIR
PPRIEGEEKNKDKRFRPIYDIPYMFEAREFMRKKIIGKKVNVTVDYIRAATSASETSTVP
AFAERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGL
HSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITF
LLAGIECPRGSRNMPSGMQVAEPFSDEAMAFTKELVLQREVEVEVESMDKAGNFIGWLHI
EGVNLSVALVENALSKVHFTAERSSYYKTLVSGEEASRLRKDKIWANYEEKKVEEVVHVT
EEKERTANYRAVYVTEITDAMHFYTQDVETGTQLENLMETMRAEIAAQPPVEGSYAARRG
DYCIANFSADGEWYRARVEKVESPAKVHVFYIDYGNRERVPSTRLAVIPPAFSTRTLAAQ
ATEYTFAYIQVPQDEDARADVVDSLVRDIQNTQCLLNVEHSGVTCPHVTLQFADSKDDVG
LSLVKEGMVMVDVRKEKHLQKMVTEYLNGQESAKTARLNIWRYGDFRDDDADEFGYKLKK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtacggtgtgtttccggtatagcgtgtgttcacagttatccagccttttcctc
ttgggtttcaatagaacagtcatttctgactcccggctccttacctgtttccccctaaac
ggcgtatctaactttgtggacatggcatcatcagtttcggcacaggcgaatcctgctccg
gttgcggcgctccagagaggaatagtcaagatggtcttgtcaggatgtgcaataatcgtg
cggggccagccacggggaggcccgcccccggagcgtcagatcaacctgagtaacatccgt
accggggtgctggctcgccgcgccccccagagccagcccgaccaaaaggacacccccgac
gagccctatgccttccaggccagagagttcctgcgcaagatactggttgggaaggaggta
tgcttcacagtggaggtcaagaccgctctgggcagagaatacggcatggtgtacctgggc
agagacaccaccggcgagaacattgctgagtgtctggtgaacgagggcctcgccaccgtc
cgcagggaaggaatccggggcaacaatccagatcaggctagactgtgtgacctggaggac
caggccaaggcctccaagaaaggcatgtggacggagggcggtggcactaacaccgtacgc
gacctcaagtacagcattgagaacccccgcaacttcgttgactccatgcaccagaaacct
gtcaatgccatcattgagcacgtgcgcgacggtagtgtggtccgtgccctgctcctgcct
gactactacctggtcacggtcatgctctctggggtcaagtgtccaacgttcaagcgcgag
gcggacggcacggagtcgccagagccctttgctgccgaggccaagttcttcacagagtca
cgtctgctccagagggacgtgcagatcatcctggagagctgccccaaccaggtcatcctg
ggtaccatcctccacccgaacgggaacatcacagagctgctgctgaaggaagggttcgcc
cgctgtgtggactggtccatggccgtctacacccagggagcagagaaactccgggccgga
gaaaaatctgctaaagagcgtaaagtgcgtatctggaaggactacgtagcccccacagcc
aacatggaccagaaggacaggcagtttgtggccaaggtgatgcaggtcgtaaatgcggac
gccatcgtggtcaagctcaactctggcgagtacaagaccattcacctgtccagcatccga
ccccccaggatcgagggcgaggagaagaacaaagacaagcgtttccgtcccatctacgac
atcccctacatgttcgaggcccgcgagttcatgaggaagaagatcattggcaagaaggtg
aacgtcacggtggactacatcagagctgccaccagcgcctcagagaccagcaccgtcccc
gcctttgcagaacgcacctgtgccaccgtcaccatcggcggcattaacatagccgaggcg
ttggtcagtaaaggtttggccacggtcatccgctacagacaggacgacgaccagcgctca
tcccactacgacgagctactggctgcagaggcacgggcaatcaagaacgggaaagggctg
catagcaagaaggaggtccccatccacagagtggctgatatctctggggagacacagaag
gccaagcagttcctgccattcctccagagagcaggccgctctgaggcggtggtagaatac
gttttcagtggctcccgcctgaaactctacatgcccaaagagacctgcctcatcaccttc
ctccttgctggtattgagtgtccacgcggctccaggaacatgcccagtggcatgcaggtg
gctgagcccttcagcgacgaggcaatggccttcaccaaggagctggtactgcagagagag
gtggaggtagaagtagagagcatggacaaggctggtaacttcatcggctggcttcacatc
gagggggtcaacttgtcggtggcgctggtagagaacgccctatccaaggtccacttcaca
gccgagcgtagctcctactacaagactctggtgtccggagaggaggcctctcgtctcagg
aaagacaagatctgggccaactacgaggagaagaaggtggaggaggtggtccacgtgacg
gaggagaaagagcgcacagccaactacagagctgtatacgtcacagagatcacggacgcc
atgcacttctacacccaggacgtggagacaggcacccagctggagaacctgatggagacc
atgagggcagagatcgccgcccagccccccgtggagggctcgtacgccgcccgccgaggg
gactactgcatcgccaatttctccgccgacggagagtggtacagagcccgggtggagaaa
gttgaatcgccagcaaaggtacacgtgttctacatcgactatggcaacagagagagagtg
ccgtccactcgcctggctgtcattccaccggccttcagcacccggacccttgccgcacag
gccacagagtacaccttcgcctacatccaggtcccacaagacgaggatgcgcgtgcggac
gtggtggacagcctggtgcgggacatccagaacacccagtgtctgctcaacgtggagcac
agcggcgtcacctgcccccacgtcacactgcagttcgccgactccaaggacgacgtcggc
ctcagcctggtcaaggagggcatggtcatggtggacgtgcggaaagagaagcacctgcag
aaaatggtgacagagtatctcaacggtcaggagtctgccaagactgccaggctcaacatc
tggcgctacggagacttccgcgacgacgacgcagacgagtttggctacaaactaaaaaaa
tga
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