Coregonus clupeaformis (lake whitefish): 121543490
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Entry
121543490 CDS
T08357
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121543490
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
FERM domain-containing proteins
121543490
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_C_FAK1
FERM_f0
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121543490
NCBI-ProteinID:
XP_041709309
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All DBs
Position
3:27750281..27784093
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AA seq
1792 aa
AA seq
DB search
MEEKERSRSRSPSRSRRASRVQQVVGTLIRRTRESLSRERILGDGRSNRSGSVSSQNFPV
RLTVQIVRDPVLDSSGHGFTLSKQHPLLVRDVATGGPADGILYPGDQVLQMNDLVVDDLS
YEQLQDITRDLEDSVTMTILRHMTGPKSSIMSAEKRARLRSNPIKVRFAEEVVVNGHTQG
NSLLFLPNVLKVYLENGQTKAFKFDATTTIKDIVLTLKDKLSIRCIEYFSLVLEQQYSIT
KLLLLHEDELIHKVVQKKENSSHDYRCLFRVCFIPRDPLELLQEDPTAFEYLFLQSVGDV
LQERFAVEMKCNTALRLAALHMHERLDSIGSTRTSIKSITKEFGLDSFISPTLLSNMREK
DLRKAISYHLKKIHSLLEPRQKVISATQARLAYLTQLGELISYGGRSYTATMMLQDREAL
VSLLVGARYGLSQVVNHKLNMVSTLVDFSSISRVELLSESDRVSLLRISLHDIKPFALLM
DSLAAKDLACLLGGYCKLLVDPRVCVFRLRRPKVRVHRIPAEEGVCEGRFAVIEGVCYES
LTSYVSRCCSDSDDSSDEDYPAEPPPTHTRKRHTPASKDREGWRREEEEQRGAEGKKERA
EIEDEEKQEVKIIVTSEKDMEVEEENGREVRGREINLGSKANIGTVEQDMVLDTNWYHTD
PRVNSSFSSLSSGSLRAALEESSAAAPARGGGPAKASSRVVALREDSPSLRSQRPTQGIT
TLDVHHPFLLEVTAPSPQCQRVGAAGSTASAPVRPTNLSYRSNDSSCLYFTELSKGSYLP
SPPEATSDEEEMEEVEDDDDEEELRRLSKIPSHIDLRLIDKICAQSNKTASNNKLDIPRI
IPNHTSSCEKRAACSSTHKGEESLSSHSGDSGPFLTPSPNAPPPVARESASESDDEFFDA
QERFTPPVPPDGTENSLDAADNNRHSKRWSGTGNGLPVVPEREPPSPLKKKHSSPDHKKQ
QETQQDPKLHSNQSSTQSVDAKTKPPPLAPKPQLPPKPELAPKPELAPKPQIDPQRSPKR
GGPYAHCNGDARGGHAGLLEIDTMEPETMEFKSVTSGAGGPPLASPLITAVRKNQQPPAG
PQAVENGLRQENGPKIENGSKQENSSKIENGTPNVLPKDRVLVTADKQTAMVETKTNRIS
MLKGEFRNGVGVDPPKKLQSLSPIPRSASGDEIRISLTTPPPLSPRTSPPSLHPLTVLPI
PVSPKEKEGVSPPNGLHPWGSRNGSAQSGRKVSLSHENLSPKNADGPHSLTTSLTISSSK
GTAGGPESTGRSGSGSDLRVSSSSLGGRLPTSALRGRIQALPWYMTRSQEILGTLDYPST
SSVNEDVTSGYGSGLSVSGASEVSKVTAKAVGETAAGKGKKEVLEDGAEVVIATIKEFQE
VTPRVKEANGTNGSHPNQTLRENGAHVSEPYGFLGSCKSEQPQSRPHSEVGLGGGSGPPL
EGDSLVHTPPQAHHEACGCRTVYANCFSGDVEDGCGFDEELTIYEFSKRTRPKQARSTPL
PSPTSPVPSPNILSLLRDTPRPLSTLSTASSEFSPLLSHPISPTPPIGALCSLTNKRYVG
LKGGFASLRQDIDQLCLVLERGTAGPPPSSEPSKTDQDGCREGGPNPNQDVGQEEGPTAC
CGGASPLPMTEAERSLLQAEARRLATGCQRATRVGWAPEEALRSLSNSFSALVQLSAACL
RTHPCPGCDICRNEGQIQSADDEGQEEALDKLKEIVGLYREFVGAVETAETRAGAGGGTG
SGDGQGQGEGEGVRLLAKRCTVLISSVFALTQLFRTHSPDTTDLAGQTHLHF
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagaggagtaggagccggtctccatctcgtagccgtagggccagccgg
gtgcagcaggtggtggggacgttgatcagacgcactcgagaatcactcagcagagagcgg
atccttggggatgggaggtctaaccggtcaggtagtgtgtccagtcagaacttcccagtg
aggctaacggttcagatcgtcagagacccggtgttggactccagcggtcatgggttcacc
ctctccaaacagcaccccctgctggtcagggacgtggctacaggtggcccagcggatggc
atactgtaccctggagaccaggtattacagatgaatgacctggtggtagatgatctcagc
tatgaacagctgcaagacatcaccagggacttggaggactctgtcacaatgacaatctta
aggcacatgacaggtcctaagtcgtccatcatgtcggcggagaagagggctcgtctgagg
agtaacccgatcaaagtgcgcttcgcagaggaagtggtcgtcaacggtcacactcaggga
aactctcttctgtttctgcccaacgttctgaaggtctacctggagaacggacagaccaag
gccttcaagttcgacgctaccaccaccatcaaggacatcgttctgactctgaaggacaag
ttgtctatccgctgtattgagtacttttctctggtgctggaacagcagtacagtatcacc
aagcttctgctgctgcacgaggatgagcttatacacaaggtggtgcagaagaaggagaac
agcagccatgactacaggtgtctgttcagggtgtgcttcattcccagagaccccctggag
ctgctacaggaagaccccaccgccttcgagtacctcttcctccagagtgtcggggacgtt
ctacaggagaggtttgcggtggaaatgaagtgtaacactgcactgcgtctggctgccctg
cacatgcacgagagactggacagcataggctccacccggacctctatcaagagcatcacg
aaagagtttggtctggacagcttcatctctcccactctgctcagtaacatgagagagaag
gacctgaggaaagccatcagctaccacctcaagaagatccactcactgctggagccacga
cagaaggtgatctcagccactcaggcccggctggcctacctcacccagcttggagagctc
atctcctacgggggccgctcctacacagccaccatgatgttgcaggaccgggaggcgctg
gtcagtctgttggtgggagcgcgctacggcctgagtcaggtggtcaaccacaagctcaac
atggtgtccaccctggtagacttcagcagcatcagtagagtggagctgctctctgagtcg
gacagagtcagcctgctacgcatctcactgcacgacattaagccttttgccttactgatg
gactctctggcagccaaagacttggcgtgtctactggggggctactgcaagctcctggtg
gaccccagagtgtgtgtgttccgtctgagacgccccaaggtgcgggtgcacaggatacct
gctgaggaaggtgtgtgtgaagggaggttcgccgttatagagggagtttgctatgaatcg
ctgacaagctatgtgtcccgctgctgtagtgactccgatgactcgtctgacgaggactac
cccgccgagcctccaccgacgcacacccgcaaacgccacacacccgccagcaaagacagg
gaggggtggaggagagaagaggaggagcagagaggagcggagggaaagaaagagagagct
gagatagaagacgaagagaaacaagaggtgaagatcattgtgacgtcagagaaggacatg
gaagtagaggaagagaacggaagggaagtgagaggaagagagataaatctaggaagtaaa
gctaacataggaacagtggaacaggacatggtgctggacactaactggtaccacacagac
ccgcgggtcaacagtagcttctccagcctgtccagtggctctctgagggctgccttggag
gagagcagcgctgcagctccagccagaggaggaggcccagccaaggcctcctctcgcgtg
gtcgccctgcgcgaggacagcccctctctccggtcccaacggccgactcaggggatcacc
accctggatgtccaccacccgttcctcctggaggtcacagctccctctcctcagtgtcag
agagtgggcgccgccggcagcacggcctccgcgcccgtacgccccaccaacctgagttac
cgtagcaatgacagctcgtgcctgtacttcaccgagctctccaagggcagctacctcccc
agcccccccgaggccaccagcgacgaggaggagatggaggaagttgaggatgacgatgat
gaggaggaactgagacggctctctaagatacctagtcacatagacctgcgcctcatcgac
aagatctgtgcccagtctaacaaaactgcttccaacaacaagttagacatccccagaatc
atccccaaccacacctcctcctgtgaaaagagggcggcttgtagctccacccacaaaggg
gaggagagtctatcaagtcactctggagattccgggcctttcctaacgccttcccctaac
gctcctcctcctgttgctagggaaagtgcctcagagtcagacgatgagttcttcgatgcc
caggagcggttcactcctccagttcctcctgatggcacagaaaacagtttggatgcggct
gacaataatagacacagtaaacgctggagtggcacagggaacggactgccagtggtacca
gagagggagcctccctcacccctcaaaaagaagcactcctcacctgaccacaaaaaacag
caggagacccaacaagatccaaagctccactcaaaccagtcttccactcagagtgtcgat
gccaagaccaagcctccaccattggcccccaagccccagctaccccccaaacctgaactg
gcccctaaacccgaactagcccccaaaccccagatagacccccagaggtctcccaagcgt
gggggtccatacgcccactgtaatggggatgctcgtgggggccacgcagggctcctggag
atagacaccatggagccagaaacaatggagtttaaatcagtcacctcgggggcggggggg
cctccgctcgcctcccccctcatcacggctgtacggaagaaccagcaaccccctgctgga
cctcaggctgtggagaacgggctcaggcaagagaatgggcctaaaatagagaacggttct
aagcaagagaacagttctaagatagagaacgggactcctaacgtgcttcctaaggatcgt
gttctggtcactgctgacaagcagacagccatggttgaaactaaaacaaataggatttcc
atgctaaagggtgagttccgaaacggggttggggtggaccccccgaaaaagctgcaaagc
ttgtcccccattccacgttcggcttcaggagatgaaatcaggataagccttaccacccct
ccaccactctctcccagaacttcccctccttctcttcatcccctaacagtcctccccatc
ccggtctcaccgaaagagaaagagggggtgtcccccccgaacggcctccacccctggggc
agtcgcaatgggagcgctcagtccgggaggaaggtctctctgagtcatgagaacctgtcg
cccaaaaacgcagacggcccccacagtctgacaacctccctcaccatttcctcctctaaa
gggacagcgggaggtccagagagcacagggaggtcagggtcaggttcagacctgagggtc
agttcgtccagcctggggggccgtctgcctacctcagccctgagagggaggatccaggcc
ctgccctggtacatgacccgctcccaggagatcctgggcaccctggactacccctccacc
agctctgtcaacgaggatgtcacatccgggtacggctccggtctttcggtcagcggagcc
tccgaggtcagcaaggtcactgccaaggcagtaggtgagactgcagcgggtaaagggaag
aaggaagtgctggaggatggagccgaggtcgtcatagcgaccatcaaagagttccaggaa
gtgactccccgtgtgaaggaggccaatgggacgaatgggtcgcaccccaaccagaccctg
agagaaaatggggcgcacgtctctgagccctatgggtttctgggctcctgcaagtcagag
cagccccagtccaggccccactcagaggtgggtttagggggtggttcaggcccaccccta
gagggggactctctggtgcacacccctccccaggcccaccacgaggcgtgtggctgccgc
accgtctacgccaactgcttcagcggcgacgtggaggacggctgcggctttgacgaggag
ctcacaatctacgagttctccaaacgcacgcgccccaaacaagcccgctctacacccctg
ccctcccccacctcccctgtcccctcccccaacatcctgtccctgctgagggacacccct
cgccctctctccaccctctccactgcctcctcagagtttagccccctcctgtcccacccc
atctccccaacgcctcctataggcgccctgtgctccctcaccaacaaacgctacgtaggg
ctgaaggggggctttgcctccctgaggcaggacatcgatcagctatgcctggtcctggag
agaggcacggctgggccaccaccatcatcagaaccctccaaaacagaccaggatgggtgt
agagaagggggacccaacccaaaccaagacgtggggcaagaggagggtccgaccgcgtgc
tgtggaggggcaagtcctctgcccatgacagaggctgagaggagtttactccaggcagag
gcccggcggttggcaacagggtgccagcgtgccacacgtgtgggctgggctccggaggag
gcgcttcgttccttatccaacagctttagtgcccttgtgcagctctccgcagcctgcctg
agaacacacccctgtcctggctgtgacatctgccgcaatgagggtcagatccagagcgct
gatgatgagggccaggaggaggctctggacaagctgaaggagatcgtagggctgtaccgg
gagtttgttggggctgtggagacggctgaaaccagggctggggctggcggtgggactggg
tctggggatggacaggggcagggagagggtgagggggtgaggctgctggccaaacgctgc
acggtgctcatctcttccgtctttgcgctcacgcagctgttcaggacgcactcgccggac
accacagacctggcaggtcaaacacatctccacttttga
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integrated database retrieval system
