KEGG   Coregonus clupeaformis (lake whitefish): 121543513
Entry
121543513         CDS       T08357                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121543513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121543513
   03036 Chromosome and associated proteins [BR:cclu03036]
    121543513
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     121543513
   Coactivators
    SAGA/TFTC/STAGA complex
     121543513
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     121543513
    STAGA complex
     121543513
    TFTC complex
     121543513
    SAGA complex
     121543513
    SLIK complex
     121543513
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10
Other DBs
NCBI-GeneID: 121543513
NCBI-ProteinID: XP_041709358
LinkDB
Position
28:29363746..29369638
AA seq 162 aa
MTQYQPQSNRSNFFTVKTEASSTPPLATSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgctccaacttcttcactgtgaaaacagaggcc
tcctcaacaccacctctcgccaccagcatggccaatagcagcgccgccgccccagggaag
gtgatgggcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgatcccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgacttcattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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