Coregonus clupeaformis (lake whitefish): 121543522
Help
Entry
121543522 CDS
T08357
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121543522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121543522
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121543522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
121543522
NCBI-ProteinID:
XP_041709372
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MPEPTKKDEMPNGEKESVAPDSSEAPMPTPEISLKVSPPPPEQPVETEGKDPQPIEVLKP
VEPQPVVAKEPEPVENGSKEPEPEAVAVRAKEQVESVNSEVKEEAPSPCSPPPPATPLPT
VKEEAEPVVMEVTQPPEPVVTVVTPPPPPPPEPVVTVQVTPPPPPPPEPVVMVQVTPPPP
PPPAGLEECVSVRMQERVYIDKDDDATTNTPSPPPPPEDANTLKKLSIEMPNDSVHVSAM
GRKDSVWSLGEGQAPEDLDKPIDTPPLSSLLIESPQGGSITVGGDISFVAKVEAKDLLRK
PTIKWFKGKWMDLASKTGKHLQLKETFDRRTKIHTFEMHIIKAKDNYAGNYRCEVTYKDK
FDSCSFDLEVKELEQSQSVDIRSAFKRSSEGHEDAGDLDFSGLLKHRNQREPKQEETPEV
DVWEILKSARPDQYEKIAFEYGITDLRGLLKRLKKTKKEEKKSEAFAKKLDPAYQVDKGG
KIRLVVDLADPTVELKWYKNGQEIRPTPNQRKFIFEQKGTQRIMVINNCCLNDDAAYSVA
AGEEKCTTELFVKELPVKITKEIEAVKTTVNERIELECEVSEEGAQIKWCKNGVEVPTGP
RSRYRVKSEGLKHWLIIDDASKEDTGTFSVMASGGTSEAKVQVDLKPLKIIQDLQDMTVL
LGQPLKMHCEIFPGNVPGRWYRNGQLIQSNDRINILQRAKNHRLEIANSTIHDAGDYTFV
PEGYSQSLCAKVHIIDPPRVHLESLNFPDNTVTIVAGNKLRVEIPISGEPAPRVVWMKGE
RVILDSGHRVRAETFTDHTSLTIDIAEKEDTGNYKIVLQNEAGEATASVKVKVVDIPDPP
EVPLVPEVGGDWCSMTWDPPIYDGGSPILGYFIERKKKQSSRWMRLNFDLNKETTFEPKK
MIEGVPYEVRVFAVNAIGVSKPSEPSKAFVPLAVTSEPTMLVVDDITDTTVTMKWRPPDT
IGAAGLDGYLVEYCIEGTDDWRVTNKELTEKTKYTITGLPPEAKILVRVRAINAAGASTP
RTLQHSILVKEVIEPPKIRIPRHLKQTYVRKVGEAVNLVIPFMGKPRPKVSWLKEGQTVD
PTQVTIRNTDCDSIIFIRKAERKHSGKYDMKVEVEKHVDTAIVDIQIVDLPGPPQCVKID
EVWGGNVALDWTPPKDNGNAAITGYTIQKADKKTMEWYTCIEHYHRTCITITELVVGNEY
YFRIYSENMVGLSEGATQTKDSALIVKEGKFPHDTAQHLYHAQPHSSSLPPPAGMQLKNP
EYIDHDFKEPPKFTQPLINTFAIAGYNATLNCSVRANPRPKVIWMKNKMAIIDDPRYRMF
SNQGVCTLEIRKPSPYDGGMYSCKAINDLGDALVECKLEVKGGFTFSELMQRGVPLHLID
KYMNETKAVLQPEK
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaagaaagatgagatgcccaatggtgaaaaagagagtgttgcccca
gacagtagtgaggcgcccatgcccacacctgagatatccctcaaggtctcgcctccaccc
ccagaacaaccggtagagactgaggggaaggatccacagcccatagaggtgcttaagcct
gtagagcctcagcctgtggttgctaaggagccagaaccagtagagaatgggtctaaagaa
ccagaaccagaggcggttgcggtcagggctaaagagcaagtagagtctgtgaactctgaa
gtaaaggaggaggccccgtccccttgctcacccccaccgcctgcaacccccttacctacg
gtgaaggaggaagcagagccagttgttatggaggttacccaacctccagaaccagttgtt
acagtggttaccccaccaccacccccacctccagaaccagttgttacggtgcaggttacc
ccaccaccacccccacctccagaaccagttgttatggtgcaggttaccccgccaccaccc
ccaccaccagcaggtctggaagagtgtgtgtctgtgcgtatgcaagaacgtgtgtatata
gataaagatgatgacgctacaaccaacaccccatcaccaccgcccccaccagaggatgcc
aatacactcaagaaactctctattgagatgcctaatgatagcgtccatgtgtcagccatg
gggagaaaagactcagtgtggtctctaggagagggacaggctccagaggaccttgacaag
cccatagacaccccaccgctgtccagcctgctcatagaaagtccccagggcggatccatc
actgtgggtggagacatctcctttgttgccaaggtggaggccaaagacctgctccgtaaa
cccaccatcaagtggttcaaagggaaatggatggacctggccagcaagactggaaagcac
ttacaacttaaagaaacctttgaccgacgcaccaagattcacacatttgagatgcatatc
atcaaggccaaagacaactatgctggaaactacaggtgtgaggtcacctacaaggacaaa
tttgacagctgctcctttgacctagaagtgaaagaactggaacagtcacagagtgttgat
attcgatcagctttcaaaagaagcagtgaaggacacgaggatgcaggggatcttgacttt
agtggtcttcttaaacatagaaaccaaagggagcccaagcaggaggagacccccgaagtg
gacgtgtgggagatcctgaagtcggccaggccagaccagtacgagaagatcgcctttgag
tacggcataacagacctgcggggtctgctcaagaggctgaagaagaccaagaaagaggag
aagaagagtgaagcttttgccaagaagttggatccagcataccaggtggacaaaggaggg
aagatccgattagtggtggaccttgcagaccccacagtagagctgaaatggtacaagaac
ggccaggagatccgtccaactccaaatcaaaggaagtttatctttgagcaaaagggcaca
cagcggatcatggtcatcaacaactgctgcctgaatgatgacgctgcctattctgtagcc
gcgggagaagagaagtgtaccacagagctgtttgtcaaagagttaccagtgaagattact
aaagagattgaggcagtgaaaacgacagtgaacgagaggattgagttggagtgtgaagtg
tctgaagaaggagctcaaataaaatggtgtaagaacggcgtggaggtcccgaccgggccc
cggtcacgctaccgtgtcaagtctgaggggctgaaacactggctgatcattgacgatgcc
tcaaaggaggacacaggaaccttctctgtcatggcctctgggggcacctctgaggccaaa
gtccaggtcgacttgaagccactgaagattattcaggatctgcaggacatgacagtgctt
ttgggccagcccctgaagatgcactgtgagatcttccctgggaatgttccaggtcgctgg
tacaggaacggacagctgatccagtccaacgaccgcatcaacatcctgcaaagagccaag
aaccaccgattagaaattgcgaacagcaccattcacgatgccggggattatacctttgtg
ccagagggatacagtcagagcctctgtgccaaagttcatatcattgatcctcccagggtg
cacctggagagcttgaacttccctgacaacacggtgaccattgtggcaggaaataaactt
cgcgtggaaatccccatcagtggagaaccagcacccagggtggtgtggatgaagggagag
agggtaatccttgactcgggccaccgtgtgcgagctgaaaccttcacggaccacaccagc
ctcaccatcgacatcgcagagaaggaagacacaggaaactacaagatagtcctgcagaac
gaggctggggaagcaacggctagcgtcaaagtcaaggtggtggatatcccagaccctcct
gaagttcccctagtcccggaagtggggggagactggtgctctatgacatgggaccccccg
atctatgacggaggctcacccatcttaggctacttcatcgaaaggaagaagaagcagagt
tccaggtggatgaggctgaactttgacctgaacaaagagaccacatttgagcctaaaaag
atgattgagggtgtcccgtacgaggtgcgcgtctttgctgtgaatgccattggcgtgtcc
aaacccagcgagccatccaaagcctttgtgcccctggctgtgaccagtgagcccaccatg
ctggtggtggatgatatcacagacaccacagtgactatgaagtggcgtcccccagacacc
atcggagctgcaggcttagacggctacctggtggagtattgcatcgaaggaactgatgac
tggagagtaaccaataaggagctgacagagaagactaagtacactatcactggcctccct
ccagaggctaagatcctggtaagggtaagggcaattaatgccgccggcgccagcactccc
agaacacttcagcactctatcctggtcaaagaggtcatcgaaccacctaagatccgcatc
ccccgtcacttgaagcagacgtacgttcgtaaagtcggagaagccgtcaatctcgttatt
ccattcatgggcaagcccaggccaaaggtgagctggctgaaggagggccagacggtggac
cccacgcaggtcactatacgcaacacagactgtgacagcatcatcttcatccgcaaggca
gagaggaagcactctgggaagtacgatatgaaggtggaggtggagaaacacgtggacaca
gccatcgtagacatccagatagtagacctcccagggcctccacagtgtgtgaagatagat
gaggtctgggggggaaacgtggctctggactggacccctccaaaggacaatggcaacgcc
gctattacaggctacaccatccagaaagcagacaagaagaccatggagtggtacacgtgt
attgagcactaccaccgcacctgcatcaccatcacagagctggtggtggggaacgagtac
tacttcagaatctactctgagaacatggtgggtttgagcgagggtgccacccagaccaag
gacagtgccctcatcgttaaagaagggaaattcccccatgatacagctcagcacctgtat
catgcacaaccccattcttcctcccttcctccccctgcaggcatgcaactgaagaaccct
gagtacatcgaccacgacttcaaagagcctcccaagttcacccagcccctcatcaacacc
ttcgccatcgctggctacaacgccacccttaactgcagcgtccgcgccaacccacggccc
aaagttatttggatgaagaataagatggccatcattgacgacccacgctaccgcatgttt
agcaaccaaggggtctgcaccctggagatccggaaacccagcccctacgacgggggcatg
tactcctgcaaggccattaatgacctgggtgatgcactggtggagtgcaagctggaggtt
aaagggggctttaccttctctgagctcatgcagcgtggagtgcctttacacctgattgat
aagtacatgaacgagaccaaggccgtgttgcagccagagaagtag
DBGET
integrated database retrieval system
