Coregonus clupeaformis (lake whitefish): 121543564
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Entry
121543564 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121543564
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121543564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
BRX_assoc
Motif
Other DBs
NCBI-GeneID:
121543564
NCBI-ProteinID:
XP_041709454
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MLELSSELGFVQSVCVDGICGPPSAPHPTAGSMRADELLLSNGTAGKMNGALEHSDQPDP
DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL
EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ
IEECRILRGPDGLSRGLSQREANVKGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVV
KFADTQKDKEQRRLQQQLAQQMQQLNNATTWGSLTGLGGLTPQYLAVRGHAASPTPYCSP
AANASITAALLQQATSSSNLGAFSGIQQMAGMSALQLQNLAALAAAAAAAQNSASPNANP
LSSNAASLGALASPAGTTANSSGMNSLTSLGTLQGLAGATMGLNNINALAGSVNIAQMLS
GMAALNGGLGGAGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQGAAGSQKE
GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ
AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctctcgtccgagctgggctttgtgcagagtgtgtgtgtcgacggcatatgc
ggccccccctctgcaccccaccccaccgccggatccatgagggccgacgagctgctgctg
agtaacggcacggccgggaagatgaacggggcattggagcattcggaccagcctgaccca
gacgccatcaagatgttcgtgggccagatccctcgctcctggtcagagaaggaactgaag
gagctgtttgagccctacggggctgtctatcagatcaacatcctccgagaccgcagccag
aaccctccacagagcaaagggtgctgttttgtcacgttttacacacggaaagccgccctt
gaagcccagaacgcactgcataacataaagaccttaacagggatgcaccaccccattcag
atgaagcctgcagacagtgagaaatcaaacgcggtggaggaccggaaactgttcatcggc
atggtgtctaagaagtgcaacgagaacgacatccgagtcatgttctctgcgttcggacag
atcgaggagtgccggatcctgcgagggcccgacggactcagcagaggcctcagccagagg
gaagccaacgttaagggatgtgcgtttgtcacgttttctaccagggctatggcacagaat
gcaatcaaagccatgcaccagtctcagactatggagggctgctcgtctcccatcgtggtg
aagtttgcagacacgcagaaggacaaggagcagcggcgcctgcagcagcagctggctcag
caaatgcagcagctcaacaatgccaccacctgggggagtctgacggggctgggcggcctc
accccgcagtatctggctgtaagaggacacgccgcgtcgcccaccccttactgcagcccc
gcagccaacgcatccatcaccgccgcattgcttcagcaggccacctcctccagtaacctg
ggagccttcagtgggatccaacagatggcaggtatgagtgctctgcagttgcagaacctg
gccgctttagcagcagcggcggcggcggcccaaaactcagccagccccaacgcaaacccc
ctgtcctccaacgcagcctccctcggagcgctggccagcccagcgggcaccacagccaac
tcctcgggcatgaactctctgacctctctgggcactctgcagggcctcgctggcgccacc
atggggctgaacaacattaatgcactagcaggtagcgtcaacattgctcaaatgctctca
ggtatggcagccctaaacggaggcctgggcggcgcggggctgaccaacggcacggcgggc
accatggacgcgctcacacaagcctactcagggatccagcagtatgcagctgcagccctg
cccaccctctacagccagtccctgctgcagcagcaaggtgccgccggcagccagaaagag
gggccagaaggtgccaacctgttcatctaccacctgccccaggagtttggagaccaggac
atcctgcagatgttcatgccttttggaaacgtggtctctgccaaagtcttcattgacaaa
cagacaaacctgagcaagtgcttcggcttcgtcagctatgacaatcccgtgtcggcgcag
gcagcaatccaggccatgaatggcttccagatcggcatgaagaggctgaaggtgcagctc
aagcgctccaagaacgacagcaaaccatactga
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