Coregonus clupeaformis (lake whitefish): 121543568
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Entry
121543568 CDS
T08357
Name
(RefSeq) transcription factor GATA-3 isoform X1
KO
K17895
GATA-binding protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121543568
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121543568
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
121543568
NCBI-ProteinID:
XP_041709482
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MEVSADQPRWMSHHHPSVLNEQHPGSHHPGLGHSYMDPSQYPLAEDVDVLFNIDSQGNHV
SPYYGNSVRAVQRYPPPPHNYHTSPHNRVHFMAGSQVCRPSLLHGSLPWLDGSKAMQHHS
TSPWNLSPFQKSSLHHGSPAGLSVYPRRPPPPLSGGHSSPHLFTFPPTPPKDVSPDPGIS
TPGSSSNSRQQEEKECIKYQVSLAESMKLESHSRSMASIGAQSSAHHHHPIATYPSYVPE
YGPGLFPPSSLIGGSSSSYGSKTRPKTRSCSEGRECVNCGATSTPLWRRDGTGHYLCNAC
GLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTSTTTLWRRNANGDPVCNACGLYYKL
HNINRPLTMKKEGIQTRNRKMSSKSKKSKKSHDSMDDFSKSLMEKSSSFSPAALSRHMSS
FPPFSHSGHMLSTPTPMHPSSFAPHPHSSMVSAMG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaagtatccgcggaccaacctcgatggatgagccatcaccacccatcggtgctaaac
gaacagcatcccggttcccaccacccgggcctcggccactcgtacatggacccctcgcag
tatcccctcgccgaagatgtggatgtactgtttaatatcgactcacagggcaaccacgta
tctccatactatgggaactcagtccgagccgtccagaggtacccacctcctccacataac
tatcatacttcaccacacaaccgtgtacattttatggcaggtagtcaggtgtgtcgcccc
tctctactgcacggctctctgccgtggctggacggaagcaaagcaatgcagcaccacagt
acttccccatggaacctgagtcctttccaaaagagctcactgcaccacggttccccggca
ggtctctccgtctacccccggcgtcctcctcctcccctgtccgggggccactccagcccg
cacctcttcacctttccccccactcctccgaaagacgtgtcccctgacccaggcatctcc
actccgggctcaagcagcaacagtcgccaacaggaggaaaaagagtgcataaagtaccag
gtgtccctggccgagagcatgaaactggagtctcacagccggagcatggcatcaatcgga
gcgcaatcctccgcccaccatcatcaccccatcgccacatacccatcctatgtccccgaa
tacggcccaggcctcttcccaccaagtagcctgataggtgggtcatcttctagttatggt
tccaaaacaagaccaaaaacaaggtcatgttcagaaggtagagagtgcgttaactgtgga
gctacgtcgaccccgctctggaggcgggatggcactggtcactatttgtgtaacgcctgc
ggactctatcacaagatgaacgggcagaatcggcccctcatcaaacccaagcgacgactg
tctgcagcaagacgggcaggaacatcatgtgcaaactgtcaaacaagcacgacaacactg
tggcgaagaaacgccaacggggacccggtgtgtaacgcttgcggtctatactacaaactg
cacaatatcaaccgacctctcaccatgaagaaggagggcatccagaccaggaacaggaag
atgtccagcaagtcgaagaagagcaaaaagtcccacgacagcatggacgacttctccaag
agcctgatggagaagagcagctcgttcagccccgccgctctgtcccgccacatgtcctcc
ttcccccccttctcacactccggccacatgctgtccacccccacacccatgcacccctcc
tccttcgccccccacccccactccagtatggtctctgccatgggctag
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