KEGG   Coregonus clupeaformis (lake whitefish): 121543576
Entry
121543576         CDS       T08357                                 
Name
(RefSeq) splicing factor 45 isoform X1
  KO
K12840  splicing factor 45
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121543576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121543576
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121543576
 Complex B
    121543576
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 121543576
NCBI-ProteinID: XP_041709502
LinkDB
Position
20:complement(56613722..56619733)
AA seq 430 aa
MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTAPSGFSSGDALIPLADEYDPMFPNDYEKVVKRHRDE
RQRQREQERLKEIEDREKKRKDRHEGSSAPSGFSRFPTAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYEDEGRPSRGSKAAIPPPMYEDSDRPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDATEKTPGSSSQT
AAAEPLGWGSASIADPSKKSEVNPLTEILKCPTKVVLLRNMVGRGEVDKNLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRLLDLGEQM
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtcgctttacgacgacatgggcgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcagtcacagctgaaagtaaagaaggcagctctgacc
caggctaagagtcagcggatgaagcagggtactgtcctggctccagtcatcgacctaaag
agaggaggttccgctgatgacagacagatcatagacacacccccacacattgcagcagga
ctcaaggacacagcacccagcgggttctcctcgggggatgcgctaatccccctggctgat
gagtatgaccccatgttccccaacgactacgagaaagtggtgaagagacaccgtgatgag
aggcagaggcagagagagcaggaacgactgaaggagatagaggacagagagaagaagagg
aaggacagacacgagggcagcagcgctccgagcggattttcccgcttccccacggcagag
ggagagtctgatgaggaggaggaggactatgagaaggagaagaggaaaaggagtatgggt
ggagcagccatcgccccaccctcatcgctcgtggatagtagagacagctcgtcatactcc
tatgaggatgaggggcgaccctcccgtggctctaaagctgccatccctccccccatgtac
gaggactccgaccgtccccgctcgccacctggcggtcccaccaactcattcctggccaac
atgggagggacagtggcccataagatcatgcagaagtatggcttccgggagggccagggg
ctgggcaaacacgagcagggtctcagcacggccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacgccactgagaagacaccaggatccagtagccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagcggacccctccaagaagtca
gaggtcaaccccctcacagagatcctcaaatgccccaccaaagtagtgctgctacggaac
atggtgggcagaggagaggtggataagaatttggagggggagaccaaagaagagtgtgag
aaatacggcaaggtcatcaagtgtgtcatctttgagattgcccaggtgacagatgatgaa
gcagtgaggatatttctggagtttgagagagtcgagtcagccatcaaagctgtggtggat
ctgaatgggaggttctttggtggtcgggtggtaaaagcctgcttctataaccaggataag
ttcagactgttggatctgggagagcagatgtga

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