Coregonus clupeaformis (lake whitefish): 121543600
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Entry
121543600 CDS
T08357
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X1
KO
K05629
atrophin-1 interacting protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
121543600
NCBI-ProteinID:
XP_045081183
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All DBs
Position
15:60542170..60784794
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AA seq
1591 aa
AA seq
DB search
MSKTLKKKNHWTNKVHESVLCRNKEGELGFELKGGAENGQFPYLGEVRQDKVACQSGKLS
QDELLLEVNETPVAGLTIRDVHAVVRHSKDPVRLKCVKQGGVIDKDLRHYLNLRFQKASV
DHELQQIIRDNLYLRTVPCTTRQPKEGEVPGVDYNFVTVDRFMELEKSGALLESGTYEEN
YYGTPKPPCEPSPLLLNVTDQLLPGARPSSKGKRKRNKSVSNMEKAGIEPPEDEEEERPV
VNGNGNGITPESSEHEDKSTDVSSGDVPPQTCPSTETPTTPNNEGPQEEGGELAKSPPKP
DENESELGPLPDNWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKEDELPYGW
EKIDDPIYGSYYVDHINRRTQFENPVLEAKRRVQQHQQMQEQGLSSLPLPTIYREKPLFT
RDATQLKGSFLSTALQKSSMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMDTGDVIV
YINDVCVLGTTHADVVKLFQSVPIGQSVTLVLCRGYQLPYDPEDPGASAGATTTLLSPLG
LMEQRPLLVNGRSNYDSYMDYISRTARFVQEHGDQHLNAHHHHQPPPPHPGDTHLDGSSL
TPGGPHGEDSVSMASSGATQTELLTLTMVKGAEGFGFTIADSPTGQRVKQVLEPQGCPGL
CEGDLIVDINQQGVQGLSHTQVVELLKECAVGAETSLVIQRGGGGHYSPWKTPKQVLEQW
DAAQGQGGGQGSPQTSLSAPVVPHNAPFLTRHLHRASFPDSAFPEGFDLSRPDPYDLYEK
SRAIYESSRQPGMPRTTFSVDHSGAEYQEVEVHLRRQKSGFGFRILGGDEAGQPVSPDTR
EKILIGAIIEKSPADRDGRLRPGDELIFVDGIPVAGKPHRYVIDLMHGAARNGQVNLTIR
RRLQGPGEPCPENGRSPGSVSTQHSSPRSDFTNVTYPGNNAAPPTAAMGTGSTTDGAPTS
NVQQPPSDVIIHRKESEGFGFVIISSLNRPETAAAISVPHKIGRIIDGSPADRCGKLKVG
DRILAVNSQSIINMPHADIVKLIKDAGLSVTLQIIPQEELSPSAPSSEKQSPVVTQQHSP
QAQPSPTVAQPSPTVAQPSPAVTQPSPAVTQPSSLTHQSPITQTPAPPPQIYTHDSSYRS
EVKARQDVKPDIRQPPFTDYRQPPLDYRHPPVADYRQPPTLDYRHPPLMDYRQLSTDPRH
FPMPVPHDYRQIQPQMPQMPQVYQDFDFFTVELEKSMKGFGFSIRGGREYKMDLFVLRLA
EDGPAIRNGRMRVGDQIIEINGETTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDS
TSPWDARPSASPSLSEVALPPDTLTMPSPSSHLTPPQQPPGPDLAHLPPPEVPWEPVAQE
SRRAERSQSPRKALAEPHNPDQTGHGRRDRDRPSGSGCSSRSAKQKEGGRSTRRGSGPKE
GGPVGRDEQLPGGGEAKSSSRGRSKERIAGESSSSMSHGKREPTQSPTKGSKPSYTNSNG
NGGSGDGTQSGRGSHPDISVGHQGEPAQEKPRPREAERGTEETRPCRPTKITSSGSTAAG
RKATVSPGPWKIPGSDKLPSTLRSGTSTVSR
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaccctgaagaagaaaaaccactggaccaacaaagtccatgagagtgtcctt
tgcaggaataaggaaggggagctcgggttcgagttgaagggaggcgcggagaatggacag
ttcccttatctcggggaggttaggcaagacaaggtggcctgccagagcggcaaactgtcc
caagatgaactactccttgaggtcaatgaaacgccagtggccggactaacaatcagggat
gtacatgcagtggtcagacacagcaaagaccctgtccgccttaagtgtgtcaaacaaggg
ggcgtcatagacaaggacctgcgccactacctcaacctgcgcttccagaaggcctcagtg
gaccacgagctccagcagatcatcagagacaacctctacctccgcaccgtaccctgtaca
accaggcagcccaaggaaggagaggtcccgggggtggactacaactttgtgactgttgac
cggtttatggaattggagaaaagtggagccttactagagagcggaacttatgaagagaac
tattacggcacccccaagcccccgtgcgagcccagccctctgctgctaaatgtaacagat
cagctcctgccgggcgcccgacccagctccaaggggaagaggaaacggaacaagtcggtc
agcaacatggagaaggccggcatcgagccacccgaggatgaggaagaggagaggcccgtt
gtcaatggcaacggcaatggcatcaccccagagtccagcgaacatgaagacaagagtaca
gatgtctcctcgggggacgtcccccctcagacctgtccctccaccgagacccccaccacc
cctaacaacgaaggcccccaggaggaggggggcgagctagccaagtcaccccccaagcca
gatgagaatgagagtgagctaggccctctgccagacaactgggagatggcctacacagag
aagggagaggtgtactttatcgaccacaacaccaagacgacgtcgtggctggacccgcgg
ctggcgaagaaggcgaagccaccggaagaatgcaaagaggacgagctgccgtacggctgg
gagaagattgatgaccctatttacggcagctactatgtggaccacataaacagaaggacc
cagtttgagaacccagtcctggaagccaagaggagagtccagcaacaccagcaaatgcaa
gagcagggtctgtcctcgctgcccctacctactatctacagagagaagcccctgttcaca
cgggacgccacccagctgaagggcagcttcctgtccacggccctgcagaagagcagcatg
ggctttggcttcaccatcatcggaggggacgagccagatgagttcctgcaggtcaagagt
gtcatacctgacggccccgctgcacaggacggaaagatggacacaggtgatgtcatcgtg
tacatcaatgacgtgtgtgtcctgggcaccacccatgccgacgtggtcaagctgttccag
tcagtgcccatcgggcagagcgtaaccctggtgctgtgccgtggctaccagctgccctac
gaccccgaggacccgggtgccagcgccggcgccaccaccaccctcctctccccactgggc
ctgatggagcagcgccccctccttgtcaacggacgctcgaactacgacagctacatggac
tacatctcgcgcacggcgcgctttgtccaggaacacggtgaccagcatctcaatgcccac
caccaccatcaacccccaccgccgcaccccggcgacacccacctggacggctcctccctg
acgcccggcgggccgcacggcgaggactcggtgtccatggcatcatcgggggcgacgcag
acggagctgctgacgctgaccatggtgaagggggcggaggggttcgggttcaccatcgca
gacagcccgacgggccagagggtgaagcaggtgctggagccccagggctgtcctggtctg
tgtgagggggacctgatcgtagacatcaaccagcagggagtgcagggcctcagtcacacc
caggtggtggagctgctcaaggagtgtgccgtcggggctgagaccagcctggtcatccag
aggggtggaggaggtcactattcaccctggaagacccctaaacaggtgttggagcagtgg
gacgcggcccaaggccagggagggggtcagggcagcccccagaccagtctgtctgccccc
gttgtcccccacaacgcccccttcctgacccgccacctccacagggcctcattcccagac
tctgccttccccgagggctttgatctgagcaggcccgacccctatgacctctatgagaag
tccagggctatctatgagagtagtaggcagccaggcatgccgcggaccaccttctctgtg
gaccactcaggagcagagtaccaggaggtggaggtccacctgaggaggcagaagtccggc
ttcggcttccgcatcctggggggagacgaggcgggacagcctgtgagtccggacacccgt
gagaagatcctgattggggccatcatagagaagagcccggcggacagagacgggcgcctg
cggccgggcgatgagctcatcttcgtggacgggatcccagtggcggggaagccccaccgc
tatgtcatcgacctgatgcacggcgccgcccgcaacggacaggtcaacctcaccatcagg
aggaggctacagggcccaggagagccctgtccagagaacggccgcagccccggctccgtg
tccacccagcacagctccccacgcagcgacttcaccaatgtcacgtatcctggcaacaac
gcagccccacccactgccgccatgggtacaggtagcaccacagacggggcgccgacatcc
aacgtgcagcagccacctagtgatgtcattatccaccgcaaggagagtgaagggtttgga
ttcgtcatcatcagctcgctcaaccggcccgagaccgccgccgccatcagcgtgccccat
aagattgggcgtatcatcgacggcagcccggcggaccgctgtggcaaactgaaggttggt
gaccgcatcctggcggtgaacagtcagtccatcatcaacatgccccacgccgacatcgtc
aagctcatcaaggacgccggcctcagcgtcaccctccagatcataccacaggaagagctg
agcccgtcagcccctagctcagagaagcagagcccagtagtgacccaacaacacagtccc
caagcccagcccagtcccaccgtggcccagcccagtcccaccgtggcccagcccagccct
gctgtcacccagcccagccctgcagtcacccagcccagctccctgacccaccagagcccc
atcacccagaccccagcccccccaccccagatctacacccacgacagcagttacaggtca
gaggtgaaagcgaggcaggacgtgaaaccggacatccgacagcctccattcacagactat
agacagcccccgttggactacagacaccctcctgtagcagactaccgccagccgcccacc
ctggactacagacaccctcctctgatggactacagacagctgtccactgaccccaggcac
ttccccatgcctgtgccccacgactacagacagatccagccacagatgccacagatgcca
caggtctaccaggactttgacttcttcaccgtggagctggagaagagtatgaaggggttt
ggcttcagtatccgtggagggagggagtacaagatggacctgtttgtcctgcgactggcc
gaggacggacccgccatccgcaacgggaggatgagggtaggggaccagatcattgagatc
aacggggagaccaccagggacatgacccacgcccgggccatcgagctcatcaagtcaggg
ggccggcgggtgcgtctgctcctgaagagaggcacagggcaggtcccagagtatgacagt
acctccccctgggatgcacgcccttcagcctccccaagtctgtcggaagtagccctgccc
ccagacactctgaccatgccatcaccctcatctcatctgacaccgccccagcagccccca
ggccccgacctggctcacctgccacctccggaggtcccgtgggagccggtggcacaagag
agcaggagggcagagcgctcccagagcccccggaaggccctggccgagccgcataatcca
gaccagaccggccacgggaggagggaccgggaccggcccagtgggagtggctgcagcagc
aggagtgccaagcagaaagagggtggcaggtccacccgcagagggagtggccccaaagag
ggagggccggtggggagggatgagcagctacctgggggaggggaggccaaaagctcctcc
agggggaggtctaaggagagaatagccggggagagcagtagcagcatgtcccacgggaaa
agagaacccacccagtccccgacaaaaggctccaagccctcatacacaaactctaacggg
aacggcggcagcggcgatggtactcagagcggcagaggcagtcacccagacattagtgtc
gggcatcagggggagccggcacaggagaagcccaggcccagagaggcagagaggggcact
gaagagacccggccctgccgccccaccaagatcaccagcagcggcagcacggcagcgggt
aggaaggccaccgtgtcccctgggccctggaagatcccaggctctgacaagctgcccagc
accctgcgctcgggcacgtccactgtgagcagataa
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integrated database retrieval system
