Coregonus clupeaformis (lake whitefish): 121543606
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Entry
121543606 CDS
T08357
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121543606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121543606
03012 Translation factors [BR:
cclu03012
]
121543606
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121543606
Translation factors [BR:
cclu03012
]
Eukaryotic type
Release factors
121543606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
121543606
NCBI-ProteinID:
XP_041709558
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All DBs
Position
3:28316345..28323599
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AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESIGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccaaacgcagcggacaggaacgtggagatatggaaaatcaagaagttg
attaaaagtttggaagctgcccgtggtaatggaaccagtatgatctcgctgatcattccc
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttgggacagcctcc
aacatcaagagcagggtcaacaggctctctgtgctcggggccattacctctgtacagcag
agactaaagctatacaacaaggtgccccctaacggcctggtggtgtactgtgggaccatt
gtgacagacgagggcaaagagaagaaagtcaacatagactttgagccttttaaacccatc
aacacctccctgtacctctgtgacaacaagttccacactgaggcgttgacggccctgctg
tctgatgacagtaagtttggtttcatagtgatagatggtagcggggctctctttgggaca
ctccaggggaacaccagagaggtgctgcacaagttcaccgtggacctgcccaaaaaacac
ggcagaggaggtcagtctgctctgcggtttgcccgtctgaggatggagaagagacacaac
tatgtaaggaaggtggctgagacagctgtccagctctatgtgtccaacgacaaggtcaac
gtggccggaatggtcctagcaggttctgccgacttcaagactgagctcagccagtccgac
atgtttgaccctaggttacaggcgaagattctgaagctggtggacatctcgtacggagga
gagaacggcttcaaccaggccatcgagctgtcggcagaggtcctctccaacgtcaagttc
atccaggaaaagaagctcatagggcggtactttgatgagatcagtcaggacacagggaag
tactgtttcggggtggaggacacactcaaagccctggagatgggagctgtggagatcctc
atcgtctatgagaacctagacaccatgcgctacatccttcgcctgcacggggccgagagc
atcggaacagagaacgatgagaagactctgtatttaacaccagagcaggagaaagacaag
tcccacttcacagacaaggagactgggcaggaccacgagctgattgagagcatgcctctg
ctggagtggttcgccaacaactacaagaagtttggagccacgctggagattgtcacagac
aagagtcaagagggctcccagtttgtcaaaggctttggaggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcagaggacgacgagtttttcgattta
gatgactactag
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