Coregonus clupeaformis (lake whitefish): 121543636
Help
Entry
121543636 CDS
T08357
Name
(RefSeq) protocadherin beta-16-like
KO
K16499
protocadherin delta 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121543636
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Protocadherins
121543636
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
121543636
NCBI-ProteinID:
XP_045063905
LinkDB
All DBs
Position
3:28405995..28413470
Genome browser
AA seq
1028 aa
AA seq
DB search
MIFLGGIEMEHRLASTRWTPLTGLVVCLLVCACVVDLVLAQIRYSIPEELEHGAFVGNIA
EDLGLDVAKLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVV
IENPLELYRVEVEILDVNDNSPIFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRS
YQLSSNEHFVLNIQTRNDGSKFAELVLETPLDREQQKTHEMVLTAVDGGSPERSGTALIT
ITVLDANDNVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKV
RELFSVDQYTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDVLDVNDNAPE
VILTSVSTPVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVT
SEFLDREAVSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNA
PGAFICSVTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLR
NFQIRVQAQDAGFPPLSSNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYL
VAKITALDADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRFVDKDSTRQRVVILVK
DNGQPPLSATVSILLSVVDNVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAI
IVLAAVKCYKDRETLSGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISTGTKVPTNCM
EVNGNGTLSQAYCYKVCLTPESAKSDFMFLKPCSPISTPRNNEAKGAENLAWSAHNRSAS
VNNNSGATTPNELKQPNTDWTLTKNQNSTLKSCNSINMDGTLMRKAMHADPENYMTPMAG
QYWTWGTHMRDYKMSPPATGPPPRSWTPRCTPPPPQQQPQPQQPPLPPHPHPHPHPHPHP
PPDYQHNVYIPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFIHNYEPQTEQAAAV
INNDLYND
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgattttcttgggaggcattgagatggagcacaggctcgcgagcacgcggtggacaccg
ttaactgggctggtggtgtgcctgctggtgtgtgcgtgtgtggtggacctggttctggca
cagattcggtactccatccccgaggagttggagcacggggcttttgtcggtaacatcgct
gaggacctcggtttggatgtggccaaactgtccgcccgtcgcttccggatagtctccggt
gccaagaaacagtacttagaggtgaatctggaaaacggtattttatttgttaacgagaag
atcgaccgtgaggagctgtgtgaacggagcccgacctgcttcttacacttgcaagtggtg
atcgagaatccgttagaactgtaccgagtggaggtggagattttggatgtgaacgacaac
tctcccattttcccgtggagcgagtttaatctggagattacagagtcagcggcgcccggg
tcccggttcccgttggagagcgcgcaggaccaggacgtgggcaccaactcgctcagatcc
taccagctgagctccaatgagcactttgttctaaacatccagacacgtaatgacgggagc
aagtttgcagagcttgtgctggagaccccgctggacagggagcagcagaagacgcacgag
atggtgctcacagccgtggacggggggtcgccggagcgctccggcacggctctcatcacc
atcacggtgctggatgccaacgacaacgtacccgttttcgaccggtctgtttaccgggcg
agcctggtagaaaacgcaccgagagggactttagtgctaaagctaaatgccaccgatttg
gacgagggtgcgaacggggaggtctcatacgcgttcagtgggcacgcaccgctcaaagtg
cgcgagctgttcagcgtggaccagtacacgggtgagatcagagtgaaagggattgtggac
tatgagaaagcgagtgtttatgagctgtatgtgcaggctaaagacaggggtccctcagca
gtggccgtgcacagtaaggtactggtggatgtcttagatgtgaatgacaatgcgccggaa
gtcatcctcacctccgtgtccacacctgtccaggaagatgcgccaccgggcacggtgata
gccgttataagcgtcatggaccgggattcgggagagaacgggaatgtggactgccagatc
cccagcaacgtccccttccagctccactcatcttttaagaactactacactctggtgact
agcgagtttctcgatagagaagccgtctccgagtacaacatcacactcacggcccgggac
ctgggctccccgtcgctctccactaggaaaaccattcttgtccaagtgtctgatattaac
gataaccccccgcgcttcgcccagccatcatacacagtttatgtgaccgagaataatgcc
ccgggcgcattcatttgctcagtcactgctttcgaccccgattctaatcagaacgcctat
ctgtcctactcgattctggagggtcagatccagggaatgcccgtgtccacttacgtctcc
atcaactcggacaacggaaacatttacgcgctgcgctcctttgactacgagcagctaagg
aactttcagatacgggtgcaggcgcaggacgccggtttccccccgctcagcagcaatgtc
acggtaaatgtgtttgttttggaccagaatgataacgcgccggtcatcgtgtcccccttg
cccaagaacggaaccgtggcgacagaggtggtcccgaggtcagtggatgcggggtaccta
gtcgccaagatcactgcgctagatgcggacgcaggacagaactcgcgcctctcctaccag
gtgctccaggctacggacccggggctgttcagtgtcgccctctacacgggagaaatcagg
acgattcgccggttcgtggataaggactctacgaggcagagagtcgtcatcctggtcaag
gacaacgggcagccgcctctctccgccaccgtctctatcctcctctccgtggttgacaat
gtgcccgagtcactgtctgatttcggcgacctcactctgagcccgcagcccccctccaac
ctcgccctctacttgatcgtgtcactgagcaccatctcgctaatcttcctggtggctatt
atcgtcctggctgcggtcaagtgttacaaggacagagagaccctcagtgggtataacctc
ccccccttcgcctgctgctgctgcgggggcttccagccagagccgcccccggaggtgttc
aagaaatctaacctaaacctgcagatctccaccgggactaaggtgcccaccaactgcatg
gaggtcaatggcaacggtactctgtcccaggcgtactgttataaagtgtgtctgaccccc
gagtcagctaagagtgactttatgttcctgaagccgtgcagccccattagcaccccgagg
aacaacgaggcaaagggggctgaaaacttggcttggagcgcgcacaaccggagcgcatcg
gtgaataacaactccggagccaccactccgaatgagctcaagcaaccaaacacagactgg
accctcacaaagaaccagaactccactctgaaaagctgtaactctatcaacatggacggc
actctgatgaggaaggccatgcatgcagacccagagaactacatgacacccatggctggc
cagtactggacctggggcacccatatgagggactacaagatgtctcctcctgccactggg
cctcctcctcgctcctggaccccccggtgcacccctccaccaccccagcaacagccccaa
ccccagcagcctccactccccccacacccacacccccatcctcaccctcacccccaccca
cctccagactaccagcataatgtgtacatcccgggcacaccgtcggccctgtgcaccctg
aggccagcagccacccaccaccgcagcgagctggacgtccacaactccttctctaccttt
ggcaagaagagacgcttcatccacaactacgagccccagacagagcaagcagcagctgtc
atcaacaacgacctgtataacgattaa
DBGET
integrated database retrieval system