Coregonus clupeaformis (lake whitefish): 121543649
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Entry
121543649 CDS
T08357
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121543649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543649
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121543649
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121543649
NCBI-ProteinID:
XP_041709621
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Position
28:complement(2635337..2702936)
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AA seq
730 aa
AA seq
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MPRNFIRGTLPKENESYLCRMEPEAKERGTTENRGSSSTREQHSSCSSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSSLTGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMAVGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPSALASGDPLSE
APSTGTVGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQ
TIAVIGPVFGYLLGSLCAKIYVDIGFVNMESITITPGDARWVGAWWLGYLIAGVITLLSA
IPFWFLPRSLPIPSDRGPAQCTPEQTSFIKDSPLLEHKYKADEPDSFLEMAKDFIPTLKT
LLGNPVYFIYLCVTIIQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIF
TGGLLMKRLKLSIMGAAKFAFSTSLIGYFLSLFFFAMSCENAKVAGITLPYNRVDGVSYE
EPSVFSACNSDCVCSDKDWDPVCGEDGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVTAG
LSSGNLTASVGHCPHRDDCDRVFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLA
LGFHTLSTRTLAGIPAPIYFGAIIDTTCLKWGQKRCGGTGACRIYNTTSYRIAYLGLTMG
LRTVSFLLCILGFVLLKRHLRREERSAHQVANGGAELEALRKEEVLAFNSDQSLRTSTTD
YNNTERETRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatttcattaggggaactttgcccaaggaaaacgagagctatctgtgtagg
atggagccggaggccaaggagagagggacgacagagaacagaggcagctcctctacgagg
gagcaacactcctcctgctccagcctcaagatgttccttgtggccctgtcgtttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagagacgc
tttgacatccccagttccctaacaggtgtcatcgatgggagctttgagataggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagcc
atgggctgtgtactgatggcagtgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataagttcgaaacgtcaatccgatcgtcagtgaattcaaccaataacctctcc
ccatgtccagcgcgcctgttgtcaccctccgcgctagcttcgggtgacccgctttctgag
gcaccaagcacagggacagtaggttgtgaaggagagtccaacctctccatgtggatctat
gtgttcctggggaacgtcttacgagggatcggggagactccagtgcagccccttgggatc
tcgtatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcag
accatagcagtcattggtcctgtgtttggctatttactgggatccctgtgtgccaaaata
tatgtggacattggatttgtcaacatggagagtatcaccataacccctggtgatgctcgc
tgggtgggggcctggtggttaggttaccttatagctggggtgatcaccctgctttcagcc
atccccttctggttcctgccccgttccctgcccatcccgtcagaccgaggcccagcccag
tgcaccccggagcagactagcttcatcaaagactcccctcttctggagcataaatacaaa
gctgacgagccagacagctttctggagatggccaaagatttcataccaacgttgaaaacc
ctcctggggaacccagtgtacttcatctacctgtgtgtgaccatcattcagctgaactct
ctcatcggcatggtaacctacaagcccaagtacatagagcagcattacggacagtcagca
tcaaaagccaatttcctgatgggtacgatcaacatccctgccgtggcgttgggaattttc
actggcggcctactcatgaagaggctgaagctgagcatcatgggagcggccaagtttgcg
ttcagcacctctctgataggctacttcctatccctcttcttcttcgccatgagctgcgag
aacgccaaggtggccgggatcacactgccctataacagggtggatggtgtatcatatgag
gagccctcagtgttctcagcctgtaactcagactgtgtgtgttcagacaaagactgggac
cctgtctgtggagaggacggcatcacatacgtctctccctgcctggccggctgccagacc
tccacaggatcagggaagaacacagtgttctctaactgtagctgtgtggtgacagcaggg
ctgagcagtggtaatctgacagccagtgtaggccactgtcctcacagagacgactgtgac
cgcgtcttcccttacttcctggctctctctgtcatcacttcatttatcatctccctgggt
ggcacgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttagct
ctggggttccatactctgtccacacgtacacttgcgggtatcccagcgcccatctacttt
ggggcgatcatcgacaccacgtgcctgaagtggggccagaagagatgtggagggacagga
gcctgtcggatatacaacactacatcatacaggatagcgtacctgggtctgactatgggc
ctgaggacagtttccttcctgctgtgtatattgggatttgtgctgctcaaacgacacctg
cggagagaggaacgcagcgcccaccaagtggccaatggcggagcagaactggaggcactc
aggaaagaggaggtcctagccttcaactcggaccaatcactacggacttcaacaaccgac
tacaacaacacagagagagagacacggctgtga
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