Coregonus clupeaformis (lake whitefish): 121543666
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Entry
121543666 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121543666
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121543666
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121543666
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121543666
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Others
121543666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTP-NADK
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
121543666
NCBI-ProteinID:
XP_041709645
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MEVTVSRVLISIAQLLVFCHIVAVTEAYFKAQRKFTDDIDWSYTGQLNQKIWGKRYPACN
NARQSPIDIDETFTQVRVEYQGLQLEGWEKKTPETTTINNDGNTVVLGLDGEYYVSGGGL
STRFRVGRMTFHWGRCNASSDGSEHSLNGLKFPLEMQIFCYESDLYQSIDDAVKDGGRIA
ALAVLFETSLDNNDHYNTIIEGVNSVRRFGKTGNVEPFSLLALLPNSTDKYYTYNGSLTS
PPCAETVEWIVFKHTVPISETQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQQFLGQVF
SSYTGTEEVLTPMCSSEPQNMQADAQNDTTIMVMWERPRVVYDTTIDWYSVTYQRLQDQN
QPKHEYRTDGDQDVGAIIPSLLSNSSYVVQVVAVCTNGLTGRWSDQIIVDMPQEDPEIES
DPDNREPVDILEQVDQIPVDQNPVEESRTREGRQQIFPDQPSTTAASQVISVPVPPGTRD
DQNRIDQNPVNQSRVDKTKKDQTRKDKKKQRILPHRPFTSAASNGKSAIWVTMVTDQPGF
LIPVSRTTSPPPVRRRITEEASLSWSPQQSQNQNRGSAAQKPDVSGVSLLPPDGDMYTPP
AGGMVVTDVYYEDVVNTTALEFATTPSKTTLKKTLSPVTARPKVTMKGQDRGLVLTTMLS
DNRVSTVTRATPIQQTLVSVTSTPSVPWIRSRTSSPSNSLSTAYGSSTTSGLVKVVQNTT
QPIFTEISNSSHESRVEMVGSVAERERRTVVPLAVVSTLTIICLLVLVGILIYWRNCFQT
VELYTEDTASPKVISALSSPLLLATEEHEALSVKQFVKHVAELHQNNTFSKEFEIVTECY
EEVQACTVEMGITTDSSNHPDNKNKNRYINIMAYDHSRVKLLEEAKGGDYINANFVDGFE
RTRAYIAAQGPLKSGTEDFWRMVWQENVGVIVMITNLLEKGRRKCDQYWPMENQEEYGYF
LVTLKDTKTLAYYTLRTFTLRDTSQKASKRGCCAERTVVQYHYTQWPDMGVPEYTLPVLS
FVRASSQARTQDMGPVLVHCSAGVGRTGTYIVLDSMLQQIQEQGTVNILGFLKHVRTQRN
YLVQTEEQYVFIHDALVEAIVSRDTLVTSDLVHSYVSDLLTTGPSGRTRMERQFKLMSQR
RARQADYAAALREGNADKNRTSSLMPVERSRVCLSCPVEGDSSDYINASYIMGYHKSREF
ILTQSPLPSTVSDFWRMVWDHNSQLIISLPDTHTAQCEGEESCVYWPSKDQPISCEGFIV
SFSGEDHICLANEEKLVVHDFLLEATQDNYVLEVRQYMSPSWPNPDNPVSSTFQLLNIIT
EDSRRREGTIVVHDRLGGSMAGLFCALTTLAQQLEQQGSVDVYQVARMTNLMRPGVFNDM
EQYQFMYRAVLSLVDSQEDQRALQSPETNGSIPLGATTAAESLESLM
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactgtatccagagtgctgatttccattgcgcagctcctggttttctgccat
atagtggccgtgacagaggcgtacttcaaggcccagaggaaattcacagacgacatcgac
tggtcctacacaggccagttgaaccagaagatctggggtaagagatacccggcatgtaac
aatgcccgtcagtcacccatcgacatcgatgagacgttcacccaggtccgagtggagtac
cagggcctgcagctggagggctgggagaagaagaccccagagaccaccactatcaacaac
gacggcaacacagtggtgctaggcctggatggggagtactatgtgagtggcggtggtctg
agcaccaggttcagggtggggaggatgacgttccactggggccgatgcaacgcctcctca
gatggatcagaacacagcctcaacggactcaagttccccctggagatgcagatcttctgt
tatgagtcagacctgtaccagtctatagacgatgcagtgaaggatggagggaggatcgca
gcactggctgtcctgtttgagaccagcctagacaacaatgaccactacaacaccatcata
gaaggcgtcaacagcgtcagaagatttggtaagactggaaatgttgagcccttctctctg
ctggccctgctccctaactctactgataaatactacacatacaacggttccctcacctcc
ccgccctgcgctgagacggtggagtggatcgtcttcaaacacaccgtgcccatctctgag
acacagttggaggtgttctgtgaggtgatgaccatgcagcaagcaggctatgtgatgctg
atggactacttgcagaacaacttcagggagcagcagcagcagttcttgggccaggtcttc
tcctcctatactggaacagaggaggtcctcactcccatgtgcagctccgaacctcagaac
atgcaggcggatgcccagaatgacactactatcatggtgatgtgggagcgcccccgtgtg
gtgtatgacaccaccatcgactggtactctgtcacctaccagcggctgcaggaccagaac
cagcccaaacacgagtaccgcaccgacggagaccaggacgtgggggccatcatccccagt
ctcctgtccaacagcagctatgtggtccaggtggtagctgtctgcaccaatggcctgaca
ggacgctggagtgaccagattatagtggacatgccccaggaggacccggagattgaatct
gatccagacaatagggaacctgtggatatattggaacaagtagaccagatcccagtagac
cagaacccagtagaagagagcagaaccagagagggtcgccagcagattttccctgaccag
ccctccaccactgctgcctcccaggtgatctctgtgccagtaccaccagggaccagagat
gaccagaaccggatcgaccagaaccctgtgaaccagtccagagtggacaagaccaagaag
gaccagaccaggaaggacaagaagaagcaacgtatccttccgcatcgccccttcaccagt
gccgcctccaacggcaagagcgccatctgggtcaccatggtgaccgaccagccgggcttc
ctgattcccgtctcccgtacgaccagcccgccacctgtccgccggcgaattacagaggag
gcctcgttgtcgtggtcgcctcagcagagccagaaccaaaaccgtggttccgctgcccag
aaacctgacgtttccggtgtcagcctgctaccaccagatggcgatatgtacacccctccg
gcggggggcatggtggtcactgatgtttactacgaggacgttgtaaacaccactgcctta
gagttcgcaactacgccatctaaaacaacgctgaaaaaaacactcagtcctgttactgcc
agacctaaagtcacaatgaaaggacaggacaggggcttggttttgaccaccatgctgtct
gataacagagttagcacagtgacaagggccacccctattcaacagaccctggtttctgta
acctcaaccccctctgtgccctggatcagatctaggacttcaagtcccagcaactccctc
tccacggcctacggctcctccactacctcaggcctcgtcaaggtcgtacagaacactacc
cagcccatatttaccgagatcagtaacagcagccatgagtcaagggtagaaatggtggga
agtgttgctgagagggagaggaggacagtggtccctctggctgtggtatccaccctcacc
attatctgtctactggtcctggtgggcatcctcatctactggagaaactgcttccagacg
gttgaactctacactgaagacaccgcctcacccaaagtcatctctgctctgtcttcacct
ctgctgctcgccacagaagagcacgaggcactgtcagtgaagcagtttgtgaagcacgtg
gcagaactccaccagaacaacaccttctccaaggagtttgagattgtgacagagtgttat
gaggaggtgcaggcgtgcacggtggagatgggcatcaccactgacagctccaaccaccca
gacaacaagaacaagaaccgatatatcaacatcatggcctatgaccacagcagagtcaaa
ctgctggaagaggcaaaaggtggagactacatcaatgctaactttgttgatggttttgag
cgtacgagagcctacattgcggcccaggggcccctgaagtctgggacagaggacttctgg
aggatggtgtggcaggagaatgttggagtcatcgtcatgatcaccaacctgttggagaag
ggacggaggaagtgtgaccagtactggccaatggagaaccaggaggagtatggttatttc
ctggtgaccctaaaggacaccaagaccctggcctactataccctgaggacctttaccctc
agagacacctcacaaaaggcttccaagagggggtgctgtgctgagaggacggtggtccag
taccactacacccagtggcctgacatgggcgtgcctgaatacaccctgcctgtcctctcc
ttcgtacgcgcctcgtcccaggccaggactcaggacatgggccctgtcctcgtacactgc
agtgctggtgtggggaggacagggacctacatcgtgctggacagtatgctgcaacagatc
caggagcagggaacagtcaacatactgggcttcctcaaacacgttagaacacagaggaac
tacctggtacagacggaggagcagtatgtgtttatccatgatgccctggtggaggccatc
gtcagcagggacactttggtgacctctgacctggtccactcctacgtctctgacctgctg
accactgggccctccggcaggacacgcatggagagacagttcaagctgatgagtcagcgt
agagccagacaggctgactacgccgctgccctgagagaaggaaacgctgacaaaaacagg
acctcctctctcatgcctgtggagagatccagagtgtgtctgtcctgtccagtggaagga
gactcttcagactacatcaacgcttcctatatcatgggttaccacaagagcagggagttt
atcctgacccagtctcctctcccctccactgtctctgatttctggagaatggtctgggac
cacaactcacagctcatcatctccctgcctgacacacacacagcacagtgcgagggggag
gagtcttgtgtatactggcccagtaaggatcagccaatcagctgtgagggtttcatagtg
tcgttctctggagaggaccacatctgtctggccaacgaggagaaactggtggtccacgac
ttcttactggaggccacacaggataactatgtcctggaggtgcgtcagtacatgtccccc
agctggcccaacccagacaaccccgtcagcagcaccttccagttgctcaacattatcaca
gaggacagcagacgaagagaaggaaccatagtcgtacatgaccgcctgggtggctcgatg
gcggggctgttctgtgccctcaccaccctggcacagcagctggagcagcagggctctgtg
gacgtgtaccaggtggcacgcatgaccaacctcatgaggcctggtgtcttcaacgacatg
gagcagtaccagttcatgtacagggccgtgttgagtctggtggacagccaggaagaccag
agggccctacagtcccctgagaccaacggttctatccccctgggggccaccactgcagca
gagagcctagagtccctaatgtaa
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