Coregonus clupeaformis (lake whitefish): 121543672
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Entry
121543672 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121543672
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121543672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_9
ig
LRR_1
Ig_2
LRR_EndoS
fn3
LRR_Zer-1
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
121543672
NCBI-ProteinID:
XP_041709664
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MKDVSFVDCFFVGLAMTAFVLASEERVDCPQLCVCEIRPWFSPSSVYMEAPIVDCNDLGL
FTLPGRLPTDTQVLLLQTNNIAKIEKPLDYLANITEIDLSQNNLSSMSDIHLGRLPQLLS
LHMEENWIRQLPDSCLAELANLQELYMNHNLISSISPTAFQGLHNLLRLHLNSNKLQTIS
SEWFDTMPNLEILMIGENPITSVQDMNFKPLRNLRSLVLTRMNLSQLPDGALSGLDNLES
ISFYDNTFPEVPHAALRNLKNLKFLDLNKNPIGRIQRGDFADMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQVHFREMTEICL
PLISPESMPGRVSVDNGSSVSLHCRAFAEPEPEIYWITPSGTRVLPNTVSDKYYMHPEGT
FDIYDVTENEAGLYTCVAHNLVGADLKSVSVEVDGYFPRPANGSLDVNIKSVQTNSVLVA
WKAAHGGLAPNIKWYMASNPNHPTMAFTARVPSDVKVYNLTHLTPATQYKVCVDIRGILY
KHDTKCVNVTTKGLELAAKDTEKWHAAVIAVFGVLLAVISVACLLIYVSLRNHHLNGDLR
KCHSKVSLTPVAGLHSPFTRLWVSGKGLPTAVEVKPTVINVSDNAF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcatttgtggattgtttcttcgtgggccttgccatgactgcctttgtt
ctggcctctgaggagagagtcgattgccctcagctatgtgtgtgtgagatcagaccctgg
ttctcgcccagctccgtgtacatggaggccccaattgttgactgtaatgacttgggactt
ttcactctgcctgggagattaccaacggacacacaagtgctattgctgcagaccaacaac
attgcaaagattgagaaacctttggattacctggccaacatcacagagattgacttgtcg
caaaacaacttatcctcaatgagtgacatccacctcgggcggctgcctcagctgctgtcc
ctacacatggaggagaactggatacgccagctgccagacagctgcctggcagagctggcc
aaccttcaggagctttacatgaaccacaacctgatctcctccatctcccccacggcgttc
cagggcctccacaacctcctccggctccacctcaactccaacaagctgcagacgatcagt
agtgagtggttcgacaccatgcccaatctggaaatactcatgattggagagaatccgatc
acctccgttcaagacatgaacttcaagccccttcgtaatctccgaagtctagttctgacc
aggatgaacctatcgcagttacccgacggcgctctatctggccttgacaacttggagagc
atctcgttctatgacaacaccttccccgaagttccccacgcagctctgaggaacttaaaa
aacctaaaatttctggatctaaacaagaatccaatcgggaggatacagcggggagatttc
gcggacatgctccacctcaaagagctgggcattaacagcatgccggaactggtctctatc
gacagctttgccctcaacaacctccccgaactgactaagatcgaggccaccaacaacccc
aagctctcctacatccaccccaatgctttctacaagctgcctaggctggagactttgatg
ctgaatgggaacgcgctcagcgccctacacaggattaccgtggagtccctccccaacctg
cgggaggtgagcatgcacagcaaccccatccgctgcgactgtgtggtccgctggatgaac
atgaacaagaccaacatacgcttcatggaaccggattcactcttctgcgtggagcctccc
gagtacgagggtcaacacgtccggcaggtccacttcagggagatgacagagatctgtctg
cctctcatctcccctgagagcatgcccgggcgagtcagcgtcgacaatgggagttctgta
tcgctccattgccgggcctttgccgaacctgaaccggaaatctactggatcacgccttcc
ggtaccagggtcctgcccaataccgtttcagataaatactacatgcacccagagggaaca
tttgacatctatgatgtaacagagaacgaggctggactgtacacctgcgttgcccacaat
ctggtcggcgcagacctgaagtcagtctctgtggaggtggatggatacttcccccgacct
gccaacggctctttggacgtcaacatcaaatcagtgcagaccaactcggtcctggtggcc
tggaaagctgcccatggtggtctggctcctaacataaagtggtacatggcttccaacccc
aaccacccgaccatggcattcactgcacgcgtaccgtctgatgtgaaagtgtacaatctc
acacatctgactcccgccacccagtacaaggtgtgtgtggacatccgtggcatcctctac
aaacacgacaccaaatgtgtcaatgtcaccacaaaaggattagagctggcggccaaggac
actgaaaagtggcacgcggcagtaatcgctgtctttggtgtgcttctcgctgtgatttca
gtggcctgtctgcttatttatgtgtctctgaggaaccaccaccttaatggggatttaagg
aaatgccactccaaagtgtccctgacgccagtggctggcctgcactctccttttacgagg
ctgtgggtctcagggaaaggactgccaaccgcggtggaagtgaaacccacagtcataaat
gtatctgacaatgccttttaa
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