KEGG   Coregonus clupeaformis (lake whitefish): 121543700
Entry
121543700         CDS       T08357                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121543700
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121543700
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C UPF0242 FRP
Other DBs
NCBI-GeneID: 121543700
NCBI-ProteinID: XP_041709772
LinkDB
Position
28:35378384..35422134
AA seq 1637 aa
MLILHIASLLTLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREMYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYDCESAFPGISVGPL
VKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYSLFDMVVRGNCFCYGHASKCAPVDGIHVSTEGMVHGRCMCNH
NTEGLNCEHCKDLYNDLPWRPAEGRNTNACKMCECNYHSRSCHFDMAVYLSMGNVSGGVC
NECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPAGSLQGGVCDDRTDVSAGLI
AGQCRCKASVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVNNDCSPISGQCQCRGHMYGRRCDQV
ESGFYFIALDHYTYEAEDAKHGRGVTVVPRPYPLDRSPTWTGPGFVNVPEGAHLEFHINN
IPDSMDYDMLIRYEPQFPEQWEQVEIRVMRPYSKRVGQPFSPCENTLPGGDQQLVSLPPG
SRHVVLPRPVCLEKGRNYTMHLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELELFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPSGCRPCECSPTGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCRPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLGGYHGDPV
LGLGGNCRPCMCPDGPGSGRQYADGCYQTANNYQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLKCLHHTEGYGCQRCKLGYYGNAATQSCSR
CMCYSVGTTSEVCPSPGECHCDLQTGQCPCRPNVIGQNCDRCAPDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCRPGFGGRKCNECRDMFWGDPEVKCQACNCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGEFPACERCHRCFAEWDRVVGELTNQTQRLKDHVTE
LQTNGVTAPYKDTVSSLEISANAISAIVENNPAIQRMEDVQQMLQQATELVADLNERLNV
SEDSLSRLVANANDTKASMDTLREQARELERTVKDMRDHIKTVKNSNIEGAMDTITEAHL
ESKRAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLAMELD
TLDLSELSKQTCGVAGGEEGCAASPCGGVGCVSDDGTNRCGGEGCDGLVTQTQSALKTAK
DLDQEILSTMQEVDKLSRMVWEVKVRADEAKLSAQEVLLKSNQSRDRVEHSNEQLRSLIK
EIRDLLTNDRANVEVIEAVSNEVLALEMPTSPGQLEALTQEIRDRVGTLTRVEDILSQSA
NDIHTAKRLLEQARTASQEASEMKATAALVKEALETTEHAQNAAIDAVKQAHNNTRGTLD
LITSVESETGGVGAASE
NT seq 4914 nt   +upstreamnt  +downstreamnt
atgttgatattacatatcgcatcacttttgaccctcgggtggcgctcctttgcgcagctg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgcgcacaccagctcaccgcctcatccacttgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacctggaggaggagaagaagtgttttgtgtgtgactccagggag
atgtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacgcatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttggaaagaagtggcaagtg
taccgttactatagctacgactgtgagtccgccttccctgggatatccgtgggaccattg
gtcaaagtggacgacgtcatctgtgactcccgctactctgacatagagccatccacagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagtttactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactactactccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgtgcccct
gtagatgggatacatgtaagcacagagggcatggtccatggtcgctgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttatacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaactaccactccagg
tcatgtcactttgacatggctgtgtatctgtctatggggaacgtgagtggaggagtgtgt
aatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacttgagagaccccaacatctgtgaaccgtgtagctgtgacccg
gcgggctccctgcagggtggtgtgtgtgacgacaggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaaggccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaaccccctg
ggtacgctgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtgaccagtgtctgccgcaacactgggggctgagtaatgac
atggacggctgcagatcatgtgactgcgaccagggcggagccgttaataatgattgttct
ccaatatcaggccagtgtcagtgtagaggacacatgtatgggaggcgttgtgaccaggtg
gagtcaggattctacttcatcgccctggaccactacacctatgaggctgaggacgccaag
cacggccgtggtgtgacagtggttcccaggccttatcctctggaccgtagtcctacctgg
acagggccagggtttgtcaatgtacctgagggagcccacctggagttccacatcaacaac
atacctgactccatggactacgacatgctgatccgctatgaaccacagttcccggagcag
tgggaacaggtggagatcagagtgatgcgtccttactcaaagagagtgggacagccattc
agtccatgtgaaaacacgctaccaggaggagatcagcagttggtgtctcttcctccagga
tccagacatgtggtgctcccgaggcctgtgtgtctggagaaggggcggaactacaccatg
catctcagtctacctctctactcctctctcagtgacgtccaaagcccatacacactcatc
gactctttggtgctgattccgcgggtgcgtgagctggagttgtttgagggttctcagggc
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacagacatctgtaacgactacatcttcagcgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctctcagtgcggtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaacgtggcgggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccctcaggatgcagaccctgtgagtgtagtcctacgggc
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgtaccaggggcgtcg
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccggccctgc
cagtgcaacggcaacagcgactactgccaccctcagactggggagtgccagggctgccga
gccttcaccaccggacacatgtgtgaaaggtgtctgggtggttaccatggcgacccagtg
ttgggtttggggggtaactgccgcccgtgcatgtgtcccgacgggccagggagcggacgc
cagtacgcagacggctgctaccagaccgctaacaactaccagttggtctgtgtctgcagc
cctggatacagaggagccaggtgtgatgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggaccca
gggtcctgcgacgctcgtacgggcgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaaactgggttactacggcaacgccgccacccagagctgcagtagg
tgtatgtgttattcagtgggcacgacgtcggaggtgtgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaattgcgac
cgctgtgcccctgatacgtttaacataggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcggggcagtgctcatgcagg
ccaggtttcgggggaagaaaatgcaacgagtgccgagatatgttctggggagatcctgag
gtcaaatgtcaagcgtgtaactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccaatgtgcc
agggggtaccatggggagttccctgcctgcgaacgatgccaccggtgcttcgccgagtgg
gaccgcgtggtaggggaactgaccaatcagacgcagcgtttgaaagatcatgtgacagag
ctccagaccaatggggtgacggcaccatacaaagacaccgttagcagtctggagattagt
gctaatgctatcagtgcgatagtagagaacaaccctgctatacagaggatggaagatgta
caacagatgttgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgccaatgccaacgacaccaaggccagtatggac
acactgagagagcaagcccgagagctggagagaacagtcaaagacatgagagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccgaggcccacttg
gagtctaagagggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgcgaagcggaggccagactgagccagaaccaggcagag
tttgacctgagacaacagaaacacacagagagactggagcggctcgccatggagctcgac
actcttgacctatcagagctcagcaagcagacatgtggagtggctggaggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcagatgatggcaccaatcgctgt
ggtggagaggggtgtgacggtctggtcacacagacacaaagcgctctgaaaacagccaag
gacctcgaccaggaaatcctgtccaccatgcaggaagtggacaagctctctaggatggtg
tgggaggtgaaggtgcgtgcagacgaggccaagctgagtgctcaggaggtgctgctgaag
tccaaccagagccgagatagagtggagcacagcaacgagcagctccgcagcctcatcaag
gagatacgagacctactcactaacgaccgtgccaacgtggaggttatcgaagcagtgtca
aacgaggtgttggccctggaaatgcccacgtcgcccgggcagctggaggccctgacccag
gagatcagagacagggtgggaaccctcaccagagtggaggacatcctcagtcagagtgcc
aacgacatacacactgcaaagaggctgctggagcaggcccgcaccgccagtcaggaggcg
tctgagatgaaggcgacagctgccctggtgaaggaggctctggaaactactgagcacgct
caaaatgctgccatcgacgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcatcacctctgtggagtcggagacgggcggagtcggagctgcgtctgagtaa

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