KEGG   Coregonus clupeaformis (lake whitefish): 121543720
Entry
121543720         CDS       T08357                                 
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121543720
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121543720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121543720
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    121543720
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 121543720
NCBI-ProteinID: XP_041709798
LinkDB
Position
28:34697002..34715906
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEMADQLLQLKQDVESCYF
AAQTMKMKIQTSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLVTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPSN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQSNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVINDHEDDFELRKQLISQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTNKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgtgcaggctctttatcatgatccg
gaccccgccggtaaagagcgagcctcggtgtggctgggggagctacagagatcgatgtac
gcgtgggagatggcagaccagcttctccagctgaaacaggacgtggagtcttgttacttc
gccgcccagaccatgaagatgaagatccagacatcgttctttgagctccccccagagacc
cacatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctcccttcgcatcgga
gccaatcgcaggacagagattatcgaggacctggcctattactccagtaccgtggtcact
ctactggtgacgtgtgtggagaagtctggcagcaatgagaagatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagtgctgcagagagacgagacgtccactaacctgcac
gaggctgcgtccgactgcgtgtgttcagcgctgtacgccatcgagaacgtggacacacac
atgcccctggccctgcagctattccagggcgtcctcacgctggagacagcctaccacatg
gctgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgaaacgtttctggagaccacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacacccccaatatgaggttgtggagatctcc
tttaacttctggtatcgtctgggagaacacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctacatccagagactgctgcacggcctggcccgccattgccaacta
gaccccgaccacgagggcatcccagaagatacagatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttggagcaggtggtgctgctgccagagacggtccatatcgctgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcc
atccataacatctgctctgtgtgtcgggatcacatggcccagcacttccagggcctgctg
gacatcgcccgtgccctcgactccttcgccctgaccaccgaagccgccgtaggcctcctc
aaagggacagccctggtcctggctcgtctgcccctggagaagatcgctgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccagcaat
gggaaagctgctgaccccactgtctggctggacagactagcagtcatcttccgacacaca
aatcccattgtagaaaatggacagacacacccatgtcagaaagtcatccaggagatctgg
ccggtcctatcagagactctaaacacacaccaggctgataaccgcatcgtggagcgctgc
tgtcgctgcctgcggttcgctgtgcgctgcgtgggcaagggctctgcctcgctactacag
ccactcgtcacacagatggtcagtgtgtaccaggtgtatccccactcctgcttcctgtat
ctgggcagcatcctggtggatgagtacggcatggaggaaggctgcagacaaggtctactg
gacatgctacaggctctgtgtatgcccaccttccagctattggagcagtccaacggtctc
cgtaaccacccagacacagtagacgaccttttcagactcgccaccaggtttgtccagcgt
agtcccgtcaccctgctcagcagtggcatcatcgtccacatcatccagtgtgccatcgcg
gccaccacattggaccaccgggacgccaactgcagtgtcatgaagttcgtcagagacctc
atccacacgggcgtcatcaatgaccacgaggatgactttgagctgcggaagcagctaata
agccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgacgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctagagaatgcgctgaaggggcttcctaaggag
acgtcaggcggggcggtgaccgtcacaaacaaacagctcacagacttccacaagcaagtc
accagtgcggaggagtgtaagcaggtgtgctgggccatccgggagttcaccagattgttc
cgatag

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