Coregonus clupeaformis (lake whitefish): 121543736
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Entry
121543736 CDS
T08357
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121543736
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121543736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
EGF
CUB
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
121543736
NCBI-ProteinID:
XP_045064430
LinkDB
All DBs
Position
28
Genome browser
AA seq
1044 aa
AA seq
DB search
MGSACFSWDVCLFFVLINTCEVMGNVGLADADECSEATDDCHIDALCQNTPKSFNCICKP
GYKGDGKQCEDMDECENDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECLDN
NGGCQQVCVNTMGSYECMCKQGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCTLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSKTCIDL
CSVAPRKCRPEFHDDDERDEAAIESSEFNATSVADVDKRVKRRLLMETCAVNNGGCDRTC
KDTATGVRCSCPVGFTLQPDGKTCKDIDECQEAFNNGGCDHFCRNTVGSFECSCQKGHKL
LTDERTCQDIDECSFERTCDHTCVNYPGSFECVCQEGYTLYGLTHCGDIDECSINNGSCE
HSCVNTQGGYECLCPPGQKLHWNRKDCIKAVKCLPNGKPAPRAQLSCDKRGGVEVCSLSC
PSNALFLADSENSYTLSCGVPVQPGKAPQKRNATTALLTCADTLPPPIKQKARFKIKDAK
CHLRPRNKEKHRETSKPSLQGGPLPCSDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHIT
AEFEMEMKEEEASGQCDCATSDSCNVACVRERMKQRLQSAMRTLRKSINKQQFYIQFSGT
EYEVAQKPALHVEQCSTGQVLRDGKCVSCGVGTYYSGDHDQCVVCPPGTYQDTMGQLSCE
PCPSTEGQGIAGAKNVSQCGGQCPAGQYSSDGFRPCNPCPLGSFQPEPGRVLCFSCGGGL
MTKYEGSVAFRDCEAKVHCAPGHHYNSSNHRCIRCPAGTYQSEFGQNYCITCPGNTTTDF
DGATNVSHCKNQVCGGELGDFTGFIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPEIF
LPIEDECGDVLVMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQ
VPYVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQES
KDMFPRSFIKLLRSKVTRFLRPYK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcctgggacgtttgtttgtttttcgtcctcataaatacttgt
gaggtgatggggaatgttggactcgcagatgcagatgagtgctctgaagccacagatgac
tgtcacattgacgctctctgccagaatacccccaaatccttcaactgcatctgcaagcca
ggatacaagggagacggcaagcagtgcgaagacatggacgagtgtgagaatgactacaat
ggaggctgtgtccacgagtgtatcaacatcccgggcaattacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggacgtggatgagtgcctggacaac
aacggaggatgccagcaggtgtgtgtgaacaccatgggaagctatgagtgtatgtgcaag
caaggctttttcctcagcgacaaccagcatacctgcatccaccgctccgacgatggaatg
aactgcatgaacaaggaccacggctgcgcccacatctgcagggagactccaaaggggggt
gtggcttgcgagtgccggcccgggttcgagctggcaaagaaccagagagactgtacattg
acgtgtaactatgggaacggaggctgccaacatatgtgtgacgatacggatgtggggccg
gtgtgtggctgtcaccagaagtacgccctgcactcagacagcaagacctgcattgatctg
tgctctgttgcaccacgaaaatgtcgcccggagtttcacgatgacgatgagagagatgag
gctgcaattgagagctctgagttcaatgccacgtcagtagctgatgtggacaagcgggtg
aaacggcggctacttatggaaacctgtgcggtgaacaatggcggctgtgaccggacgtgt
aaggacacggctacaggggtacgctgcagctgccccgtgggattcaccctgcagccagac
ggcaagacctgcaaagacatagatgaatgccaggaggcgttcaataacggcggctgtgac
catttctgcagaaacacggtgggctccttcgagtgcagctgccagaagggccacaagctc
ctcactgacgaacgcacctgccaggatattgacgagtgttcctttgagaggacctgtgac
cacacctgcgtcaactaccctggcagcttcgagtgtgtctgtcaggagggatatactctg
tacggcctcacacactgcggagacatagatgagtgcagcattaacaacgggagctgtgag
cacagctgtgtgaacacacagggaggctatgagtgtctgtgtccacctggtcagaagctc
cactggaacaggaaggactgcatcaaggcggtgaagtgtttgcccaatgggaagccagcg
ccacgcgcccagctcagctgtgacaagagaggcggggtggaggtgtgctcgctttcctgc
ccttccaacgcactcttcctcgcagactctgagaacagctacacgctaagctgtggtgtg
ccggtgcaacctgggaaggcaccacagaagaggaacgccaccaccgccctgctcacctgt
gcagatacgttacccccacccatcaagcagaaggcccgcttcaagatcaaagatgccaag
tgtcacctgagacccaggaacaaggaaaaacacagagagacgtccaagccgagcctgcaa
gggggtccgctcccctgttctgatgactgccaggtgacctttgtcaatctgaagtgtgac
tcatctaagaagcggcgccgtggacgcaagtccccttccaaagaggtttcccacatcaca
gctgagtttgagatggagatgaaggaggaggaagcctcaggtcagtgtgactgtgcaacc
tcagactcgtgtaacgtggcgtgtgtgagggagcgtatgaagcagaggttacagagtgcc
atgcggaccctgaggaagtccatcaacaagcagcagttctacatccagttctctggtact
gagtacgaggtggcccagaaacctgccctgcacgttgagcaatgcagcaccggacaggtc
ttacgggacggcaagtgtgtgagttgtggtgtggggacatactatagtggagaccatgat
cagtgtgttgtgtgtccccctggtacataccaggacacaatgggtcagctgtcctgtgaa
ccctgccccagcaccgagggacagggcatcgctggggccaagaacgtctcccagtgcgga
ggccagtgtccggctggtcagtattcatcagatgggtttcgtccatgtaacccctgtccc
ctgggctccttccagccggagcctggtcgtgtcctctgcttctcctgtggaggaggcctc
atgaccaagtacgagggctctgtcgccttcagggactgtgaggccaaagtccactgtgct
cctggacaccactacaactccagtaaccaccgctgtatccgctgcccagccggcacctac
cagtcagagtttggacagaactactgcatcacctgccctggtaacaccaccaccgacttt
gacggagccaccaacgtctctcactgcaagaaccaggtgtgtgggggtgagctgggggac
tttacaggctttattgagtctcctaactaccccggggactacccgtccaatgtagactgt
atctggaccatcaaccctcctcacaagagacgcatcctcatcgtggtgcctgagatcttc
ctccccatcgaagatgagtgtggagatgtgctcgtcatgagaaagagtgccctgcccacc
tccatcaccacctatgagacgtgtcagacttacgagcggccaatcgccttcacctcccgc
tcccgcaagctctggatccagttcaagtccaatgagggcaacagcggcaagggcttccaa
gtcccctatgtcacctacgatgaggactaccagcagttgatagaggacattgtccgggac
ggcaggctatacgcatcagagaatcaccaagagatactgaaagataaaaaactgatcaaa
gccctgtttgatgtgctggctcacccccagaactacttcaggtacacggcccaggagtcc
aaagacatgttcccccgctcattcatcaaactgctgcgctccaaagtcacacggttccta
cggccgtacaaatag
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