Coregonus clupeaformis (lake whitefish): 121543753
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Entry
121543753 CDS
T08357
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121543753
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
121543753
NCBI-ProteinID:
XP_045082141
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Position
17:complement(25568370..25573855)
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AA seq
758 aa
AA seq
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MKSNQERSHGCLPPKKREILALEQRPVVAAAAAETLALEQRSVVAAAAAEILALEQRPVV
AAAAAETLALEQRPVVVADTTLHTENLARLASVASERCRSTETPSPRFHVSSSSSSSPSP
SATSLSTIPLSSLSTVYPTGVGLSQYVQLAPNIQFISSGPYTGYISSQIIPSTAAGVATS
TGQQRHHLDGHCYTTALISQATKVGDQQQQLQIGLPSDLAVSVSLPTSTHFTGTHQYIQL
DSSTPLTVTSPPQGHLQPLQLHTHTGVSLLPHTHTLTLAPSQVLVQYADGSGVKKAEGGH
TKVVQLNGELERSFGKQSCAGIKGVSYSHQNNQQVHHGYEARHILIPADYTNQDSTGLQT
SLVLVANAHPHPHPHPHPHPTSGTEQDKVQVHPSLIHSEGGGICLGKPVSRTSSFTSLNS
SEVLKVSSAPHTVIQTTHHSDEPVHSLYSTTQAPIIGYIASADNQHGISYATLPQHLVIP
DGQSLQSLLIPVSGVGGVTTTTTDLEAPRSVTARTATTTASTTASQLAPAASSLPHPAYL
TAAQSKCEMLRSDGHHQSPAVLQAQVLPIQHIQIPSNTAATVLASPSPAPAPAPAPVQAS
LSPSSSPATLPPFFMRGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDT
GQTPNAVVIQFGVGELKAQVCVEVLLEYPFFVFGQGWSSCCPDRTTQLLELSCAKLCVGD
VCVSLTLRSLRSGGGAVSGRNNSCQGHEVKLRWPKQTG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagaggagccatggctgtctacctccaaagaagcgtgagatcctg
gctctggagcagaggcctgtggtggcagcagcagcagctgagaccctggctctggagcag
aggtctgtggtggcagcagcagcagctgagatcctggctctggagcagaggcctgtggtg
gcagcagcagcagctgagaccctggctctggagcagaggcctgtggtggtagcagacact
accctacacacagagaacctggcccggctggccagtgtagccagcgaacgctgcagatcc
acggaaactcccagccccaggtttcatgtctcctcgtcctcctcttcctccccctctccc
tctgctacctctctgtctacgatccccctgtcctccctctccactgtctaccccactggg
gtggggctcagccaatacgtccagctggcccctaacatccagttcattagctcagggccg
tacactggctacatctcctctcagatcatcccgtccactgccgccggtgtagctacctcc
acagggcaacagcgccaccatctggacggccactgctacaccaccgccctcatctcccag
gccaccaaggttggtgaccagcagcagcagctccagatagggctgccgtctgacctggct
gtgtccgtctcactgcccacctccacccacttcaccggaacccaccagtacatccagctg
gacagcagcacccctctgaccgtcacctcccctccccagggccacctccagcctctccag
ctccacacccacactggggtgagcctcctcccccacacccacaccctcaccctcgccccc
tcccaggtgctggttcagtatgcggatgggtcaggggtcaagaaagctgagggcggacac
accaaggtggtgcagctaaatggagaactggagaggagtttcggtaaacagagctgtgct
ggcatcaaaggagtctcctactctcaccagaacaatcagcaggttcaccatggatacgaa
gctcgacacatcctcattcccgcagactacactaaccaggattccacaggactacaaacc
tcactggtgctggtagcaaacgcccacccccaccctcaccctcaccctcaccctcaccct
accagtggtactgagcaggacaaggtccaggtccacccatcactaatacacagtgaggga
ggaggcatctgtctagggaaacctgtctccagaacctcctctttcacttccctcaactcc
tctgaggttctgaaggtctcttctgcccctcacacggttatccagaccacccaccactct
gacgagcctgtacacagcctgtactccaccacccaggcaccaatcatcggctacatcgcc
agcgcagataaccagcacggcatcagctatgccaccctgccgcagcacctggtcatccca
gacggccagtccctccagtctctcctgatacccgttagcggagtgggtggagttactacc
accactacggaccttgaggctccccgctcggtgaccgccaggacggccaccaccactgcc
agcaccaccgcctctcagctggctccagctgcctcatctctcccccaccccgcctacctc
accgcggcccagtccaagtgtgagatgctgaggtcggacggccaccaccagtcccctgct
gtactccaggcccaagtactacccatccaacacatccaaatcccatctaacacagccgct
actgtgttggcgtccccctcccctgccccagccccagctccagcccctgtccaggcttcc
ctctctccctcctcctctccagccacgctccctccgttcttcatgcgtggctccatcatc
cagctggcggacggggagctgaagcgcgtggaggacctgaagacagaggactttatccag
agtgctgagatcagcagtgagctgaagattgactccagtaccgtggaacgcatcgacaca
ggccagacacccaacgccgtcgtcatacagttcggtgtcggggaactcaaagcacaggtg
tgtgtggaggtgctgctggagtacccattctttgtgttcggccagggctggtcttcctgc
tgcccagaccggaccactcagctgctggagctgagctgtgccaagctgtgtgttggggac
gtgtgtgtctccctgaccctcaggagcctgaggagtggtggcggcgctgtgtctgggagg
aacaacagctgccagggtcacgaggttaagctgaggtggccaaaacagacaggttga
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