Coregonus clupeaformis (lake whitefish): 121543778
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Entry
121543778 CDS
T08357
Name
(RefSeq) pro-interleukin-16-like
KO
K22628
interleukin 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121543778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121543778
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Interleukins
121543778
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121543778
NCBI-ProteinID:
XP_045064240
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Position
28:6327389..6331781
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AA seq
613 aa
AA seq
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MGNTAQEKEKRTDVEGKRHKKKEAEKQGRENAEVSLPQHSQSVTRTRDSQPITTPGVGVT
TGSNSRLTNQLNGKTDTYDRSKTPARGMVREVSLSEDVFEANTPERIHLQNTENTKLPGK
LVAPSAASVRNKIHQFEALTQTSQVPVPNYLKPRRAFSVPEQLSEAREAVKLPFHPQNSP
FHPQNSPFQPQNSPFHPQNSPFHPQNTSPHLPTTSLQPKHQQGVDSGLAALKHPPVSTHT
AQGRVTTDPDIPVSHSGLGRDSLSLPLSLPLTSSSSPSSLPLLPTLARWNSEEGGWSDEE
DTDDEGTEKDEDSNYDSDSAESSVTITSTMSQSHRRSFSLSLAELCNFGEVDYDPQSSSD
SEEWLSSRSASLSSDVSALSCVSVLGSDELDRLLDDVKGLGDTTLQNYEDVQVVVLHKEV
GVGLGFTMAGGVDQNKPVIVHKVFPAGVAAEEGSIQEGDKVLSINGTALCGSSHSEVLRT
LRRARTQGMGVVVLRRGGVTDPCKGGTVTDSRGGTQTEPTNTGQRVCVRLEKRSRDLGFS
LEGGVGSSLGDKPLTVQKLFLGGPVNQVSPGDEVLEIEGVSLVGLRRLEAWTLIRTLPPG
PVDVVLHRPHKPQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggctcaggaaaaagagaaacggactgatgttgaaggaaaaagacacaag
aaaaaagaggcggagaagcaagggagagaaaacgctgaagtctctctcccccagcacagc
caatcagtgacacgcaccagggattctcagcctatcacaacgcccggagtaggggtcacc
acggggtcaaactcccgtctgaccaatcagcttaatgggaaaacggacacatatgacagg
agcaagacccctgctagaggcatggtcagggaagtgagcctgtcagaagatgtgtttgaa
gccaacaccccagagaggatacatttacagaacactgaaaataccaagttacctgggaaa
ctggtagcgccctctgcagccagtgtgaggaataagatccaccagtttgaagctctgaca
cagacatctcaggtcccagtgcccaactacctgaagcccagacgggctttctctgtcccg
gagcagctcagtgaggctagagaggcggtcaaactccccttccacccccagaactccccc
ttccacccccagaactcccccttccaaccccagaactcccccttccacccccagaactcc
cccttccacccccagaacacctccccacacctcccaactacttccctgcagccgaaacac
caacaaggtgtagattcaggcctggctgccctaaagcaccctccagtctctacacacaca
gcccagggtagggtcactactgaccctgatatcccagtctcacattctggcctggggagg
gattccctgtctctccccctgtcccttcccctcacctcctcctcctcccccagcagcctc
cccctcctccccactctggctcgatggaactcagaggagggggggtggagtgatgaggag
gatactgatgatgaaggtacggagaaggacgaggactccaactacgactcagactctgct
gaatcctcggtgaccatcaccagtaccatgagccaatcacatcgcaggagcttctctctc
agtctggcagagctgtgtaacttcggagaggtagactatgatccccagtcttcctctgac
agtgaggagtggctgtccagccggtcagccagcctgtcgtctgacgtgtcggccctatcc
tgtgtgtctgtcctgggcagtgatgagctggaccgcctgctggacgacgtaaagggcctg
ggggacacaaccctgcagaattatgaggatgtccaggtggtggttctccataaggaagtt
ggtgtgggactaggcttcaccatggcaggaggagtggaccagaacaaacctgtcattgtc
cataaggtgttcccggcgggggtggcggctgaggagggatccatccaggagggagacaag
gtcctgtcaatcaatggcacagcgctgtgtggctcttcccacagcgaggtgctgaggaca
ctaaggagggcgcggactcaggggatgggtgtggttgtcttgaggagagggggggtaaca
gacccctgtaagggaggaacagtgacagacagtcggggagggacacagacagagcctact
aacacaggtcagagggtgtgtgtgaggctggagaagcgcagcagagacctgggcttcagt
ctggagggaggagtgggttccagcctgggagacaaacccctcaccgtacagaaactcttc
ctgggtggtccagtgaaccaggtgtctccaggggacgaggtgttggagatcgagggtgtg
agcttggtgggcctgaggagactggaggcctggaccttgatcagaacactgccccctggg
cctgtggatgtggtactacaccgtcctcacaaaccacagtga
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