Coregonus clupeaformis (lake whitefish): 121543825 Help Entry 121543825         CDS       T08357                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121543825 Transcription factors [BR:cclu03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     121543825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HMG_box HMG_box_2 Zf_WRKY19 Motif Other DBs NCBI-GeneID:  121543825 NCBI-ProteinID:  XP_045064570 LinkDB All DBs Position 28:complement(15870928..15918642) Genome browser AA seq 2076 aa AA seqDB search MEVSRFSMGPQHRHILSKPLLGGHSYPSSHHLSVVRGLGTPLGSHLSPLTLPGPEALGTT PPPHLAPSKSTPVPLDKTPSQIPTPIPGGGSTSTSSSTSSSRSRTPLSAALQKYKKGDVV CTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAGGGGGERDRGRG GGGGGSSSGTVTPSDLRGFDWDETSRDSSEASSRGDSRPRLVLPSLLPHDFSRFDFDECE AATMLVSLGSSHSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASSVIPPPRR HRHPSATGGKLGTPGGAERERHTSGVQPSFHTNLTFTVPMSPSKRKTDVPPPPPPPSHPH HDYPPKPELEQGDLNPASFPVLSPQTSAHTHAYTPTFSCPRGVSTPTSRPPSSSATSPPP LLVSPTPPSPPDSGPCRVHPTSQQALRDSPVIVRNPEVPLAKFTEHPLGRGGGGGGDPKS VNSVTPQLVSTLQVPVPINAAAAATNGTVLLQSPTPTLVLVSSTPSSLTSVTPGYPTLAC ISISTTPPSSGPPLTNPASPGGGGGRMERTGSFGGEVQQPVACHPSPTALLPLILPAENL HPTPCKEIIIGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASTQSGEGQQPINHPQA ASLKTESQGGAVLLQEANEGPPTLERGPTARPTPSTDDLAPERERETERERPDSETESDV DDPFFPSVLPEPPLSVTPVKRRTQSLSALPKDGDKISPGKREKDHIRRPMNAFMIFSKRH RALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDR KKSSSDGRGLPGPGGKDIRERSMSETTEPHGVELKGVGPGLVGVSERNPGEGHVGQLSRP RAFSQSAMHSLERSERGNTQALAELAQMCGDGGGQFSGSAQTLSRSQRGVSEDMTSDEER MVICEEEGDDDVIEDPYPASSIDLKCKERVTDSDSDNASGNESDRKRVFAPVICSSSSHP TPHGRSISLSSYPSKRYDEGRGGGGLSDRRRKRGIEGGGGDGGGGVAPLSLSLSSGHSVI SSPGGPVPSALAPLGLSPLLGLGAVRVASTVVTNVVRPVVSTPVPIASKPRDGAASSIPH PPDRRSLPSQQAQLLIGSGAGSGGGGYYSSSSHNPIGAGAGPGGLVTSLVFPGHSQPTVQ LISPSPQPSSHHQLPPTAPVSAPTHNHTNGPLPLSLLQPQFLSSSSLASPGGKAITQVQY ILPTLSASSNPKSPSPQLHNLPNSIFNLPTAPPTHMSIANGKQAGPGSLMGYASSPAVGV VSPGSRVQSQSPVLQGKMLVPMATVRTASAPAQQFPLVAPPLPVQNGAQAGSKIFQIAPM PVVQSQLQQGGAGHPGSPFPITMGMATVVHPGSAPSQTMLLPPPPTRITYVQSTPGVPSP LPLVSTTTGSSSPQQAQPTPGSAYVPSPLATLGFTAIAPPGQTLVQPLITGQPPLLAPVQ SPTCPSLPSVPAPASASGGQIVTAIYPPTSVTMATGVVSMATIPPSMVYTVSSPSSLSSH ILSKHTFAPTTHTHTQPQSDRQTDRHAGERPTDRTSHSQSEKAADRQAETQAELQAYGQT DRPTLTQADRQTEKQAQAFNKSSSLVAPPSGYSLSLRPCSPPLPSRTSTGSAPGTPKLPQ LPARTPQKIKATVANIPVGSYEGGGRGKEREKDREREREKERESSGANSRFPFELERPGE SGSPSQHTHPAEESPSSDRPPEGHGPVDNTDTRSREASNKESGWKDSVPSSPLPPPLGTD PALPPPQSDKDAPPPKKVKARPPPLKKTFDSVDKVLSEVYFEERFAQLPEFRPEEVLPSP TLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPVSPKRKSRRRSSCSSEPSTPKSAAKCE GDIFTFDRPAPPSVCPPPGTGTGADGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQE HGFFPSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAAPSETSDASSLPGPSGAQ SGEGTGGGGAEPLGEEADREREGSPEEPRDSQESSR NT seq 6231 nt NT seq  +upstreamnt  +downstreamnt atggaggtgtctaggttcagtatgggcccccagcatcgccacatcctctccaagcccctc ctcggggggcacagctacccctcctcccaccacctctctgtggtccggggcctgggcacg ccactgggatctcacctgtcccccctcaccttacctggccctgaggccctgggcacgacc cccccaccacacctagccccttccaagagcaccccggtccccctggacaagaccccctcc cagatccccacccctatccctggaggggggtctacctcaacctcctcctcaacctcctcc tcacgctcccgcacccccctgtcggccgccctgcagaagtacaagaagggggacgtggtg tgcacccccaacggcatccgcaagaagttcaacggcaagcagtggagacgcctctgttct agagagggatgtatgaaggagtcccagagacgaggctactgctcacgccacctctccatg agaactaaagagatggagggagcaggaggaggagggggagagagggacagggggagagga ggaggagggggggggagcagttcgggaacggtcaccccctcggacctgcgtgggtttgac tgggatgagacgtccagagacagcagcgaggccagcagtagaggagactcccgccctcgt ctggtgctgccctccctcctcccccatgacttctccaggtttgactttgacgagtgtgag gcagccaccatgctggtgtctctgggcagctctcactctgggaccccctccttctccccc atctccaaccagtcccctttctcccccgccccctcaccctcaccctcccccctcttcgga ttccgtcccgccaacttctcccccatcaccgcctcctccgtcatcccccctcctcgcagg cacagacaccccagtgccacggggggcaagctgggcacccctgggggggcagagagggaa aggcatacctcaggggtccagccttcattccacactaacctgaccttcaccgtccccatg agccccagcaaacgcaaaacagacgttcctcctccccctcctcccccctcccacccccac catgactacccccccaaacctgagctggagcagggggacctgaaccctgcctcgttcccc gtactctccccccagacctcagcacacacccacgcttacacacccaccttctcctgtccc cgaggggtgagcacaccaaccagccggcccccctcctcctccgccacctctccccctccc ctcctggtgtccccaactcccccctcccctccagactcaggcccttgccgtgtccacccc acatcccagcaggccttgcgggactctccagtgatcgtgcggaacccggaggtacctctg gccaagtttacagagcatccattaggccgtgggggagggggaggaggtgatcctaagagt gttaacagcgttaccccccagcttgtctccactctccaagtccctgtacccatcaatgct gctgctgcggcaaccaacggcaccgtcctcctccagagccccacccccaccctggtgctg gtgtcatccaccccgtcctccctgacctccgtcacccccggttaccccactctggcttgc atctccatctccaccacgcccccctcttcgggaccccccctgaccaacccagccagccca gggggaggggggggtaggatggagaggacaggctcgtttgggggggaggtccagcagcca gtggcctgtcacccctctcctacagccctgctgcccctcatactgcctgcagagaacctg caccccacaccatgcaaagaaatcatcattggacgccccgggacagtctggaccaacgtg gaaccccggtcagttcctgtgtttccctggcattcattggtccctttcctggcaccaacc caatcagatgcctctactcagtctggtgagggccaacaaccaatcaatcacccccaagct gccagtctgaagacagagtctcaggggggtgcagtgctgctacaggaggccaacgagggc ccccccaccctggagagaggacccacagcacggcctactccctccacggacgacctggcc ccagagagggagagagagaccgaaagagagaggccagacagtgagactgagagtgacgtg gatgacccattcttccccagtgttcttcctgagccgcccctgtctgtaactcctgtgaag agacgcactcagtccctcagcgccctgcccaaagatggggacaagatcagccctggcaag agggagaaggaccacatcaggcggccgatgaacgcgttcatgatcttcagtaagcgtcac cgagcgctggtgcaccagaggcaccccaaccaggacaaccgcacggttagcaagatcctg ggcgagtggtggtatgccctggggcccaaagagaagcagaagtaccatgacctcgccttc caggtgaaggaggcccactttaaggcccacccagactggaagtggtgcaacaaagacagg aagaagtctagttctgatggccgagggctcccggggccgggtggcaaagacattagagag aggagcatgtctgagaccactgagccccatggtgtggagctgaaaggggtggggcctggc ctggtgggtgtgtctgagcggaacccaggggaggggcatgtaggtcagctatcccgcccc cgagccttctcccagagtgccatgcacagcctggagaggagtgagaggggcaacacacag gccctggccgaactggcacagatgtgtggggatggtggtggccagttttcggggagtgcc cagaccctgtcccggtctcagaggggggtcagtgaggacatgaccagtgatgaggaacgc atggtcatctgtgaggaggagggagacgacgacgtcatcgaggacccgtaccctgccagc tccatagacctaaagtgtaaggagagagtgacagacagcgacagtgacaacgcctctggg aacgagagcgatcgcaagcgtgtctttgctccagtgatctgctcttcctcctcccacccc accccccacggacgctccatctctctctcctcctacccttccaaacgctacgacgagggg agaggaggaggggggctctcagaccgcaggaggaagagaggaatagagggaggaggaggt gatggaggaggaggagtggcacctctctctctttccctgtcctcaggccactctgtcatc tccagccccggaggcccagttccttctgcccttgccccccttggcctgtctcctctcctg ggcttgggggctgtcagagtggcctctacagtggtaaccaacgtggttcgtccggtcgtg agcacgccagtccctatcgctagtaaaccccgagacggagcagcttcatccattcctcac ccgccagacaggaggtccctcccatcgcagcaggcgcagcttctgattggctccggagca ggaagcggagggggtgggtactactcctcatcctcacataatcccataggtgcaggggcg gggccaggggggctagtgaccagcttggtgttcccggggcacagccagcccaccgtccag ctcatcagtccctccccccagccgtcctcccaccaccagctgccccctaccgccccggtc tctgccccaacacacaaccacaccaacggccccctgcccctctccttgctccagccccag ttcctctcctcgtcctctctggcatcccccgggggcaaagccatcacacaggtccaatac atcctgcccaccctatcagccagctctaaccccaagagcccctcccctcagctgcacaac ctgccaaacagtatcttcaacctgcccacagctccgcccacccacatgtccatagccaat gggaagcaggcggggccaggctcgctgatgggatacgcctccagcccagccgtgggagtg gtcagcccgggatccagagtgcaatcccagtccccggtcctacagggcaagatgctggtt cccatggcaacagtgaggacggcatccgcccccgcccagcagttccccctcgtggctcca cctcttcctgtccagaatggagctcaagcaggaagcaagatcttccagatcgctcccatg cctgtcgtccaatcccagctccagcaaggtggggcagggcatcctgggagcccttttccc attaccatgggaatggccacagtggtgcacccgggttctgccccgtctcagactatgctg ctgccgcccccaccaaccaggatcacttatgtccagtccacgccaggagtcccctccccc ctgcctctggtctccacgacaacaggctcctcctccccccagcaggcccagcccacccct ggatctgcatatgttccgtcgcccctagcaacgctgggctttacagccatagccccgcct ggacagaccctagtccaacccctcatcacaggtcagcctccccttctggccccagtccag tcccctacctgcccctccctcccctctgtcccagccccagcctctgcttcagggggacag atagtcaccgccatctatccccctaccagcgtcaccatggcaaccggggtggtctccatg gcaaccataccccccagcatggtgtacaccgtctccagcccctccagtctgtcctcccac atcctgtccaaacacacatttgcccccaccacacacacacacacccagccccagtcggac agacagacagacaggcacgcgggggagagacccacggacagaacgtctcactctcagtca gagaaagcagcagacagacaagcggagacgcaggctgagctacaggcgtacggacagacg gacaggccaaccctcacacaggcggacagacagacggagaagcaagcccaggccttcaat aagagcagcagcttagtggcgcccccaagtggctattcattgtccctgcggccctgcagc ccccctctgccttctcgcacttccacaggcagtgcaccaggcacccccaaactcccccag ctcccggcgaggacccctcagaaaatcaaagccacagtggccaacatcccagtgggcagc tacgagggaggaggccgaggaaaggagagggagaaggaccgagagagggaaagggagaaa gaaagagagagctctggggccaacagtcgttttccctttgaactggagcgtcctggggag tcggggtccccctcccaacacacacaccctgctgaggagtccccctcctctgacagaccc cctgagggacacggccctgtggacaacactgacacacgcagcagagaggccagcaacaag gagtcagggtggaaggactccgtcccctcctcacccctgccccctcccttgggtacagac cctgccctgccacctccccagagcgacaaagacgcccctcctcccaaaaaggtgaaggcc cgccccccgccactcaaaaagacctttgactctgtggacaaggtgttgtcagaggtgtat tttgaggagcgttttgctcagctgccagagtttaggccagaggaggtgctgccctccccc accctgcagagcctggccacctccccccgcgcaatactgggcagctaccgccgcaagagg aagaactccacagacctggactcgtccacagaggaccccgtgtctcctaagaggaagagc agacggcgctccagctgcagctcggagcccagcacacccaagagcgccgccaagtgtgag ggagacatcttcaccttcgaccgaccagcccccccgtctgtgtgtccccctccagggaca gggacaggtgctgacggagaggacatcctgggggagctggagtttgacaaggtgccctac tcctctctgagacgcaccctggaccagagacgggccctcgtcatgcagctcttccaggag cacggcttcttcccctcagcccaggccacggcagccttccaggcacgctactcagacatc ttccccaccaaggtgtgtctgcagctgaagatcagggaggtccgccagaagatcatgcag accgccgccccctctgagaccagcgacgcctcctcgctccccggaccctctggcgcccaa tcaggggaggggacaggaggaggaggggcagagccattgggagaggaggcggatcgagag agggagggtagtccagaggagccgagggattcgcaggagtcttctagatga

DBGET integrated database retrieval system