Coregonus clupeaformis (lake whitefish): 121543838
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Entry
121543838 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel gamma-7 subunit-like
KO
K04872
voltage-dependent calcium channel gamma-7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121543838
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121543838
04261 Adrenergic signaling in cardiomyocytes
121543838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121543838
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121543838
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
DUF716
L_HMGIC_fpl
DUF7475
Claudin_3
SLAC1
DUF4064
Motif
Other DBs
NCBI-GeneID:
121543838
NCBI-ProteinID:
XP_041709915
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Position
17:complement(70069197..70096885)
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AA seq
342 aa
AA seq
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MSSCSSRALTILSTVFGACGLLLVGVAVSTDYWLLMEEGIVLQQNQSMEVKMALHSGLWR
VCFVAGTENGRCVASEYFTEPEIEITTENTANILKMVRTATPFPMVSLLFVFTAFVISNI
GHIRPQRTILAFISGIFFILSGLSLVVGLVLYISSINDEVMNRPREPEQFFNYHYGWSFA
FAASSFLLKEGAGVMSVYLFMKRYAEEEMYRPHPALYRPRLSESSDYSGQFLHPETWPPP
KRGRSDSRASSDISIQINQTPPQPTKNNPQQGNQGGGMGSNMGPGSGSSSGASYQLPQPS
GAYNTHTLQHQHSHGNSQAMAMPPSTGPPHYHTHMHMGASPC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgcagtagcagagcgctgaccatcctgtccacggtgtttggggcgtgtggt
ctgctgctggtgggtgtggctgtgtctacagactactggctgctaatggaggaaggcatc
gtgctgcagcagaaccagagcatggaggtcaagatggccctgcactctggcctctggagg
gtctgcttcgtggctgggacggagaatgggagatgtgtggcatcagagtatttcactgag
ccagagatagagatcaccacagagaatactgctaatattctgaagatggtgcggacggcc
actccgttccccatggtgtctctgctcttcgtcttcacggcctttgtcatcagtaacatc
ggacacatccggccccagcgcaccatcctggccttcatctctggcatcttcttcatcctc
tcaggactgagtctggtggtggggctggtgctctacatctccagtattaatgatgaggtg
atgaacagaccgagggagcctgaacagttcttcaactaccactacggctggtcgtttgcc
ttcgcagcctcctccttcctactcaaggagggggctggggtgatgtcagtctatctgttt
atgaagcgttatgctgaggaggagatgtaccgcccccacccagccctctaccgcccccgc
ctgtctgagagcagcgactacagcggccagtttctccaccctgagacctggcctcctcct
aagaggggccgcagcgactcccgggcctccagcgacatctccatccagatcaaccagacc
cccccgcagcccaccaaaaacaacccccagcagggcaaccaaggtgggggcatggggtct
aacatgggccctgggtctgggtcttcctccggagcaagctaccagctgccccaaccatct
ggggcctacaacacccacacactccaacaccaacactcacacggtaactcccaggccatg
gccatgcccccttcgaccgggccccctcactaccacacacacatgcacatgggcgcctcc
ccctgttag
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