KEGG   Coregonus clupeaformis (lake whitefish): 121543878
Entry
121543878         CDS       T08357                                 
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121543878
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121543878
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121543878
   04810 Regulation of actin cytoskeleton
    121543878
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121543878
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121543878
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3 vWA_SIBA-E EIF3I TM_ErbB1
Other DBs
NCBI-GeneID: 121543878
NCBI-ProteinID: XP_045072626
LinkDB
Position
Unknown
AA seq 1170 aa
MELHKYLLLFKFIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNEGEKSMLVGA
PWDGPPNTRRGDVYKCIVGEERNSNCTKTNLGESALQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCTTYMDIVMVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFELEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGTEGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSNDGDVNIAQALNGEQ
IGSYYGSEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGDEVFVSNGTLKA
EDRSQDARFGYALASVPDLNHDGYTDLLVGAPLEDGHIGAIYIYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRSIVQINMSLSFQPHSIN
IIQKTCQRGGRESACLNATACFLALSHSPGTHSNSFELSVVAMLDDRKLTARALFDDSNQ
RQTQLGVRVHTGETVCHNLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
SIAFFKDCGEDDVCVTDLVLKAHMDISGTRQQPYVIRSPRRRLAVEVQLQNKLENAYNTS
LTLHYSRNLHFSSLSIREDAQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLDFEFSCT
SLLSKVQMKLTAASDSVEREATLGDNSVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRVFMAVTEVFSYNVTGVNCSVDS
DVSKLKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDT
FFRQAKFKAVRIVSAYRLAVQESNLVTLGSGAIWRETALEVLKGRAIPISLWILIGSIIG
GLLLLALIIFIMWKLGFFTRKQIKDEELED
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggagctgcacaaatacctgctgctcttcaagttcatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggccctg
tttggtttctctgtgctacagcatgacaatgagggggagaaatcgatgctggttggtgct
ccttgggatggcccgcccaataccaggagaggagacgtgtacaaatgcatcgtaggagag
gagaggaactccaactgcaccaaaaccaacctgggtgagagcgcgttacagaatgtatct
aggaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ctggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatc
tgtgcttctgtcagtgatgacctggaacccagagagaccatcgcccctacagcacagaga
tgtactacatacatggacatagtgatggttctggatggctccaacagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacaa
atgcaggtgggggtgttgcagtatggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcagctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgtacggaggcgttcagccctgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggacggagagtcacatgat
ggggaggagctaccagatgctctggaggagtgtgagaagagaaacatcaccagatacgcc
atcgctgtattgggtcactacatccgcaggcagcaggacccagagacgttcatcagtgag
atcaagtacatcgccagcgaccctgacgacaaatacttcttcaacgtgactgacgaggcg
gcgctcaacgacatcgtagatgcactaggagaccgcatcttcactctggaggggacgctg
gggtacaatgagagctccttcgagcttgagatgtcccagatcggtttctccacacacgtt
ctcgatgatgggatcctgtttgggatggtgggggcgtatgactgggatggaggggtgctg
aaggagggcactgaggggcgtatcatgcccaccagagaggcctttgagtcagagttcccc
caggagctcaagaaccatgctgcctatctgggctacacagtgtcgtcagtgatagtgggt
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtaatt
ctgtttgaactgagcaacgatggagatgtcaacatcgcacaggccctcaatggagaacag
attgggtcgtactatggcagtgaggtgtgtgggttggacgtggaccaggatggcattact
gatgttctgctggtggcagcacccatgtacctgggccctggcaacaaggaggcgggcaga
gtctacatctactccctcagtggggatgaggtgtttgtgtctaacggtactctgaaggca
gaggataggtcccaggatgctaggtttggctacgccctggcctccgtcccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctggaggacggacacattggggcc
atatacatataccacggccagggcatacacatcatccataactacaaacagcgtatcgca
gggtcgtccttgtccccctctctgcagtattttgggcgcagtgtgagtgccagactggac
ctggatggagatggtctgttagacctggctgtgggggcccagggcagcgctgtactactc
agttctcgtagtatagtacagatcaacatgagtctgtccttccagccccactccatcaac
atcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccactcccctggaactcacagcaacagcttcgagctgtcggtg
gtggccatgttggatgacagaaagttgacagcgagggcattgtttgacgacagcaaccag
agacagacacagctgggggtcagagttcacacaggagagaccgtctgccacaacctgccc
ttccatgtgtttgacacagctgactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagtggcccagtgctggatgaaggctggcccaccaccttcaagaga
tcgattgctttcttcaaagactgtggcgaggatgatgtgtgtgtcactgatctggtgctg
aaggctcatatggacatctctgggacaagacagcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacaaactagagaatgcctataacaccagc
ctgacactgcactactcacgcaatctccacttctctagtctcagcatacgggaggatgcc
cagttgaagattgagtgtacatctctcagttccaacagtcactcatgtaacgtcagctat
cctgtgttccgctcccactccaaggtgaatttcatgttagattttgagttcagctgtacg
tctctgctcagtaaagtccagatgaaactcacagctgccagtgacagtgtagagagagag
gctacgctgggagacaacagtgttcagctccagactgtggttcaatacgaacctgacctc
ttcatcaccagtgactccaatctgaaccgttatgaagtccacccaaccagaaccatctca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaacctggagctgaggctgagcctgccctctgtagcagcaggagacagagtcttc
atggctgttactgaggtcttctcttacaacgtgacaggggtgaactgcagtgtagacagt
gatgtgtcaaagctgaaggacagacagagagacgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacagaccgctctcatacgagtcagccgcagggtccacgacacc
ttcttcagacaggctaagtttaaggcggtgaggatagtgagtgcctatcgtctggctgtt
caggaatctaacctggtcaccctggggagtggcgccatctggagggagacggcgttggag
gttctaaaggggcgggccatccccatttctctctggattctgattggtagcatcatcgga
ggccttctgctattggccctcatcatcttcataatgtggaagctggggttcttcactcgt
aaacagataaaggacgaggaactcgaggactga

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