KEGG   Coregonus clupeaformis (lake whitefish): 121543892
Entry
121543892         CDS       T08357                                 
Name
(RefSeq) meckelin isoform X1
  KO
K19348  meckelin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121543892
Cilium and associated proteins [BR:cclu03037]
 Primary cilia and associated proteins
  MKS complex
   121543892
SSDB
Motif
Pfam: Meckelin
Other DBs
NCBI-GeneID: 121543892
NCBI-ProteinID: XP_045082547
LinkDB
Position
17:complement(2399660..2409731)
AA seq 985 aa
MATLLVYICRLALFLTIKSNLLHSQQFTISFQRPADCGVEQFYDISSLSCVKCGPNQRTS
ATGLSCECVTGFRVLATNGASITCQQCPLEKRAVTEDGYGCILCPGSLTEQGTCQCPSGS
ILVERDVKGNPLEEARCEVCNGAEPALSAPNSYGDRCQRCQASFINTSQSCMCGSNILAG
GLCFPPNNLQTAVNPNVNYAELSIPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMCVM
NMHSFGSVANDACGLYNTIFRATASLGSTQDISYWRANLPWLYYGDQPGLANRVLQTEPL
PTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTAYQ
ETCVLSIADLLSVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINRGNLNDWY
LSRRVLLVDTLSGREKSLSSLPKVIRIASSIRIGFQLVPGTQKGQVFPPLLSVTYSDVLI
TDPNTQTVSVSFAVEYEMDQTEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLIDM
ETVLKFLLFYAGDLANVFFIITVGTGLYWLIFYKTVEAQHFVSVLLPLPGPQEERFMAYV
GCAFALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGDGNGEAKRDPSPVSIWRTY
FVANEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYFPPYSLTL
RYGLAATLWLCMGLLQIIFFAAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYIHG
RSVHGHADTNMEEMNINLKREAESLCGQRGLLPNTDTQTFQISITSRLRQQYDRILEPLS
RRTGPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYVVRDKLFFESVIGMEF
MEPMDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQSFILAAVLTYAQQMI
FRLIRNGIGRRNLANKTLVDQRFLI
NT seq 2958 nt   +upstreamnt  +downstreamnt
atggcgacgctacttgtgtacatctgcagattggcactatttctaacaataaaatcaaac
ctacttcactcccagcaatttacgatttcgtttcagcgtcctgcagactgcggcgtggaa
cagttctacgacatctccagtctgtcctgtgtgaaatgcggaccgaaccagaggacgagt
gcaacgggtctgtcttgtgaatgtgtgactgggttcagagttcttgccaccaacggagct
tccatcacctgtcagcagtgtccactagaaaaacgggcagtaacagaggatggctatggg
tgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtctgggagt
atactggtggagcgggatgtcaaggggaaccctctggaagaggccaggtgtgaggtgtgt
aatggagctgaacctgccctctcagcccccaacagctacggagacaggtgtcagagatgc
caggcttccttcatcaacacctctcagtcctgtatgtgtggctccaacatcctggctgga
ggtttgtgtttccctcccaacaacctccaaacagccgtgaacccaaacgtcaactatgct
gagctgtccattcctgtgcagtcggcatggttctccacaaacctctactcttcagcagct
gcctgcttggtgtatactaacctgacagcatgccaggcactggggaacatgtgtgtgatg
aacatgcactccttcggcagcgtggccaatgatgcctgtggtctctacaacaccatcttc
agagctaccgcttccctggggtctacacaggacatatcctactggagagccaatctccca
tggctttactacggggaccagccgggtctggccaaccgcgtgctgcagacagagccactt
cccactggattcagcttcaagggacgcaacaggaatacagacatcaatctagtggctgct
gtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaacttgcag
ctctgtccagacactgccaggagacaggaggcagcttacacctttggcactgcctaccag
gagacttgtgttctctccatagcagacctgttgagtgtgtatgctgagcctttattctac
gatgtgtttgtggatctgagccgaggagaggacaggagactgctccccctccccacacgc
aacctcaaccaagaatacaacaggaagttcatcaaccggggtaacttgaacgactggtac
ctatcgaggcgtgtgttactggtggacactctgagtgggagagagaagagcctcagctct
ctgccaaaagtcatacgcatcgcaagcagcatcaggattgggttccagctggtgccaggg
actcagaaggggcaggtgttccctcctctcctctctgtgacctactcagatgtcctcatc
actgacccaaacacacagactgtctctgtgtcgtttgctgtggagtatgagatggaccag
actgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttctgttctg
tattccctggtgaagaccgccagctggaagaggaggattggatctcctctcattgacatg
gagaccgtattgaagttcctgttgttttatgctggtgatctggctaatgtcttcttcatc
atcaccgtgggaacaggcctgtactggctcatcttctataagacggtggaggcccagcat
tttgtgtcagtgctgctaccgttgccaggtccgcaggaggagaggttcatggcgtatgtg
ggctgtgccttcgctctcaagactgtgcagtttctccataagctgatccagcagttgtca
gtggatatcttcttcatagactgggagagaccgcgcggcaaagccaacaagaccatccag
ggcgatggcaacggtgaggcgaagcgcgacccatctcctgtcagcatctggaggacctac
tttgtggccaatgagtggaatgagattcagaccatacgcaagatcagccccaccttccag
atcatggctgtgctcttcctactagaggtggttggcttctccagtctggccctgagggac
ccatggtcagatctccagcgcccccctcagtcctacttcccaccctacagcctgacgctg
cgctacggcctggctgccacactctggctctgcatgggactgctgcagataattttcttc
gctgcgttccatgagcgttttgttgaggataagatccgccagtttgtggacctttgctcc
atcagcaacatctcggtgttgctgctgtcccacaggtgttttggttactacatccacggg
cgctccgtccacggccacgctgacaccaacatggaggagatgaacatcaacctcaagaga
gaggccgagtctctgtgtggtcagagaggtctccttcccaacacagacactcagaccttc
cagatctccatcaccagccgactacgccagcagtacgaccgcatcctggagcccctcagc
aggagaactgggccatcgcggttggtggacgcagcctcaggacacccctttgaccagagc
accaaagcctaccacaccatgaaccgtttcctaggatctgtcatagaccatgcccatcgg
gacatggaatacgttgtgagagacaaactgttttttgagagcgtcatagggatggagttc
atggagcctatggacaagagcatcttctacaatgatgagtcccattcgttcagtgacgtg
ctgttctatgggaacgaagccactctgttgatctttgacacgctcttcttctgtgtggtt
gacctgggagcacagagcttcatactggcagccgtactcacatacgcacagcaaatgatc
tttcgattaatccgtaacggtattgggcggagaaacctggccaacaaaacattggtggac
cagagattccttatatag

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