Coregonus clupeaformis (lake whitefish): 121543892
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Entry
121543892 CDS
T08357
Name
(RefSeq) meckelin isoform X1
KO
K19348
meckelin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121543892
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
MKS complex
121543892
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GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
121543892
NCBI-ProteinID:
XP_045082547
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Position
17:complement(2399660..2409731)
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AA seq
985 aa
AA seq
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MATLLVYICRLALFLTIKSNLLHSQQFTISFQRPADCGVEQFYDISSLSCVKCGPNQRTS
ATGLSCECVTGFRVLATNGASITCQQCPLEKRAVTEDGYGCILCPGSLTEQGTCQCPSGS
ILVERDVKGNPLEEARCEVCNGAEPALSAPNSYGDRCQRCQASFINTSQSCMCGSNILAG
GLCFPPNNLQTAVNPNVNYAELSIPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMCVM
NMHSFGSVANDACGLYNTIFRATASLGSTQDISYWRANLPWLYYGDQPGLANRVLQTEPL
PTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTAYQ
ETCVLSIADLLSVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINRGNLNDWY
LSRRVLLVDTLSGREKSLSSLPKVIRIASSIRIGFQLVPGTQKGQVFPPLLSVTYSDVLI
TDPNTQTVSVSFAVEYEMDQTEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLIDM
ETVLKFLLFYAGDLANVFFIITVGTGLYWLIFYKTVEAQHFVSVLLPLPGPQEERFMAYV
GCAFALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGDGNGEAKRDPSPVSIWRTY
FVANEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYFPPYSLTL
RYGLAATLWLCMGLLQIIFFAAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYIHG
RSVHGHADTNMEEMNINLKREAESLCGQRGLLPNTDTQTFQISITSRLRQQYDRILEPLS
RRTGPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYVVRDKLFFESVIGMEF
MEPMDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQSFILAAVLTYAQQMI
FRLIRNGIGRRNLANKTLVDQRFLI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctacttgtgtacatctgcagattggcactatttctaacaataaaatcaaac
ctacttcactcccagcaatttacgatttcgtttcagcgtcctgcagactgcggcgtggaa
cagttctacgacatctccagtctgtcctgtgtgaaatgcggaccgaaccagaggacgagt
gcaacgggtctgtcttgtgaatgtgtgactgggttcagagttcttgccaccaacggagct
tccatcacctgtcagcagtgtccactagaaaaacgggcagtaacagaggatggctatggg
tgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtctgggagt
atactggtggagcgggatgtcaaggggaaccctctggaagaggccaggtgtgaggtgtgt
aatggagctgaacctgccctctcagcccccaacagctacggagacaggtgtcagagatgc
caggcttccttcatcaacacctctcagtcctgtatgtgtggctccaacatcctggctgga
ggtttgtgtttccctcccaacaacctccaaacagccgtgaacccaaacgtcaactatgct
gagctgtccattcctgtgcagtcggcatggttctccacaaacctctactcttcagcagct
gcctgcttggtgtatactaacctgacagcatgccaggcactggggaacatgtgtgtgatg
aacatgcactccttcggcagcgtggccaatgatgcctgtggtctctacaacaccatcttc
agagctaccgcttccctggggtctacacaggacatatcctactggagagccaatctccca
tggctttactacggggaccagccgggtctggccaaccgcgtgctgcagacagagccactt
cccactggattcagcttcaagggacgcaacaggaatacagacatcaatctagtggctgct
gtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaacttgcag
ctctgtccagacactgccaggagacaggaggcagcttacacctttggcactgcctaccag
gagacttgtgttctctccatagcagacctgttgagtgtgtatgctgagcctttattctac
gatgtgtttgtggatctgagccgaggagaggacaggagactgctccccctccccacacgc
aacctcaaccaagaatacaacaggaagttcatcaaccggggtaacttgaacgactggtac
ctatcgaggcgtgtgttactggtggacactctgagtgggagagagaagagcctcagctct
ctgccaaaagtcatacgcatcgcaagcagcatcaggattgggttccagctggtgccaggg
actcagaaggggcaggtgttccctcctctcctctctgtgacctactcagatgtcctcatc
actgacccaaacacacagactgtctctgtgtcgtttgctgtggagtatgagatggaccag
actgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttctgttctg
tattccctggtgaagaccgccagctggaagaggaggattggatctcctctcattgacatg
gagaccgtattgaagttcctgttgttttatgctggtgatctggctaatgtcttcttcatc
atcaccgtgggaacaggcctgtactggctcatcttctataagacggtggaggcccagcat
tttgtgtcagtgctgctaccgttgccaggtccgcaggaggagaggttcatggcgtatgtg
ggctgtgccttcgctctcaagactgtgcagtttctccataagctgatccagcagttgtca
gtggatatcttcttcatagactgggagagaccgcgcggcaaagccaacaagaccatccag
ggcgatggcaacggtgaggcgaagcgcgacccatctcctgtcagcatctggaggacctac
tttgtggccaatgagtggaatgagattcagaccatacgcaagatcagccccaccttccag
atcatggctgtgctcttcctactagaggtggttggcttctccagtctggccctgagggac
ccatggtcagatctccagcgcccccctcagtcctacttcccaccctacagcctgacgctg
cgctacggcctggctgccacactctggctctgcatgggactgctgcagataattttcttc
gctgcgttccatgagcgttttgttgaggataagatccgccagtttgtggacctttgctcc
atcagcaacatctcggtgttgctgctgtcccacaggtgttttggttactacatccacggg
cgctccgtccacggccacgctgacaccaacatggaggagatgaacatcaacctcaagaga
gaggccgagtctctgtgtggtcagagaggtctccttcccaacacagacactcagaccttc
cagatctccatcaccagccgactacgccagcagtacgaccgcatcctggagcccctcagc
aggagaactgggccatcgcggttggtggacgcagcctcaggacacccctttgaccagagc
accaaagcctaccacaccatgaaccgtttcctaggatctgtcatagaccatgcccatcgg
gacatggaatacgttgtgagagacaaactgttttttgagagcgtcatagggatggagttc
atggagcctatggacaagagcatcttctacaatgatgagtcccattcgttcagtgacgtg
ctgttctatgggaacgaagccactctgttgatctttgacacgctcttcttctgtgtggtt
gacctgggagcacagagcttcatactggcagccgtactcacatacgcacagcaaatgatc
tttcgattaatccgtaacggtattgggcggagaaacctggccaacaaaacattggtggac
cagagattccttatatag
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