Coregonus clupeaformis (lake whitefish): 121543904
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Entry
121543904 CDS
T08357
Name
(RefSeq) DENN domain-containing protein 3-like
KO
K20162
DENN domain-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543904
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121543904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
Beta-prop_LRRK2
Beta-prop_EML
WD40_Prp19
SPA
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
121543904
NCBI-ProteinID:
XP_045069431
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MADHLPSGLLEACVVVGASGDQLKDVYQSLQQGNRTTDVPFLDSEVLQVHVPPFVTKENA
DESGGPRTFSQVQCRRSFIKKKERPVVAPSGPGGAGSSEGATITEDVSVPKDIDLMALPQ
LCFPGGLQVTNEPKEERFHFLVFTDVFGNQTHGVVVQCYRPFQEGSMFYQNGHWSSTKTT
KLCIAYAFCVISKHPYYNALKDCLSCLLVQLRTCRLSEERVKEFAAKLALVPIPPPGHLH
VVFNLRPLMIVLPSREDKDHPVVDLDLHLPFLCFRSKQILQIITGILMEQRVVFFSADWA
RLTLVAECFMVYIHPLHWQHPYVPILSGQMLDFVMAPTAFLMGCHLNHFEEVAAETDDLI
LINIDDGTVSSSCSETVDLPDVPFASAECFTKRRKGLQLQYDLEVCHQGAGADINEMRML
RRKWQQNLNWEIQKVTLELIVNMFRDVSGHLNYEHRVFNSEEFLKTRELADQPFYKKVLE
THIFHSFLKDRLNRKMDAFTRMEVNTRSETQKMKAMIDIPRRPTMQEMARKYSSRPENHL
NKRLGMSLPNLGEERPLNLLRHTSLKKIIIPESAGRLKSSATLKIPPKPVKIFKLPEFPP
PMVHHYVQNYYGELIILLGKAIFCVPPENSTLLARYFYLCGFMNTLCSKRLDALSDFQNL
YKTDIEIFPTVLVKTLVDSLQKDERSQADQRPELKRLIFKVKTDNEMVLVQADDHVKKFQ
LPKTHMLQEDFVKRIQESGIVKDVTTIHRLFEALTVGQQKQIDPEVFRVFYTFWKETEVE
AQDVHLPAEVIEHLDNNECVYKLSCSVKTNQGVGKIAMTQKRLFLLTDGRPGFIEITKFR
DIEEVKISFAPFLLLRIPSLKIKCSLRKEVFEANLKSECDLWNLMVKEMWAGRRMADVHK
DPQYMQQALTNVLLMDAVVGSLQTQKAIFAASKLAYFDRVKHEVPMMVPKTTSETLKHKI
NPSLDLPAPQTVQVLLYTPGQLSYSEADGDGNPKLWCALSGGRVVLFDAASWSMQQNCIQ
VGSSQLNCMLGLDQDQLFNGTLWCCARDGIIELRKNGSPLRKMTLPEDLWSMPTEFSSLI
LFLERGQLWTSCSDSDELCLWHFKDLTKPFLRVQLQNCTGVNRMIKVKNQIWVGCRGPSP
DQCRVSGKIYVVDTESHSVAKELMAHTDSVQALCSAEDRYVLSGSAYQDGKIAIWKVE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccatcttccctcagggttactggaagcatgtgttgtcgtcggagcctctggg
gatcaactcaaggatgtctaccagtctttacagcagggcaacaggacaacagacgtccct
tttttagactcagaggtcttgcaagtccacgtgcctccgtttgtgaccaaagagaatgcc
gatgagtctggtggccccagaaccttcagtcaagtccaatgcagacggtcctttatcaag
aagaaggagaggccagtggtggctcctagtggccctggaggggcagggagcagtgagggg
gccactataacggaggatgtcagcgtccccaaggacatcgacctcatggccctgccccaa
ctctgctttccaggggggcttcaagtaacaaatgaaccaaaagaagagcgctttcacttt
ctagtcttcacggatgtgttcggtaaccaaacccatggagtggttgttcagtgttataga
ccatttcaggaagggtcaatgttctatcagaatggacactggtcatccaccaagaccact
aagctctgcattgcttatgccttctgtgtcatatccaagcatccttactacaatgctctc
aaggactgtctgtcttgtttgttggtacagcttagaacatgcaggttgtctgaagagagg
gtgaaggaatttgcagccaaactggctctggtgcccattccaccccctggacatctacat
gtggtgttcaacctgagacccctgatgatcgtactaccttccagagaggataaggatcac
cccgttgtagacctggacctccatttgcccttcctgtgctttaggtccaaacagatttta
cagatcatcactggtatcttgatggagcagagggtagtgttcttctcagctgactgggcc
cgcctcaccctggtggcagagtgtttcatggtctacatccaccccctccactggcaacac
ccctacgtgcccatcctctcaggccagatgctggacttcgtcatggcccccaccgccttc
ctcatgggctgccacctcaaccactttgaggaggtcgctgcggaaacagacgacctgatc
ttgattaatatcgatgatggaacagtgtcgtcctcctgctcagagactgtcgacctacca
gatgtccccttcgcttcagcagagtgttttaccaagcggaggaaaggcctccagctacaa
tatgatctagaggtgtgtcaccaaggggccggcgcagacattaacgagatgcgcatgctg
agaagaaaatggcagcagaacctgaactgggaaatacagaaggttaccttggagttaatt
gtcaacatgttcagggatgtcagtggtcacctgaactatgaacacagagtgtttaatagt
gaagagttcctgaagaccagagagctagctgaccaacccttttataaaaaggtcttggag
acacatatctttcattcattcctgaaggaccgcctcaataggaagatggatgctttcaca
cgcatggaagtcaacactcgctcagagacacagaaaatgaaggcgatgatcgacatcccc
aggaggcccaccatgcaggagatggccaggaagtatagcagccgcccagagaaccatctg
aacaagaggctggggatgagcctccccaacctgggagaggagcgccccctcaacctcctc
agacatacctccctcaagaagatcatcatccctgagagtgcaggaaggttaaagtcaagt
gcaaccctcaagatcccgcccaagcctgtgaagatcttcaagctgccagagtttcctcct
cctatggtgcaccactatgtccagaactactacggagagctgatcatactactggggaag
gccatcttctgtgttcctcctgagaactccactctcctggccaggtacttctacctgtgc
ggcttcatgaacacgctgtgttccaagcgtcttgacgccctcagcgacttccagaacctc
tacaagacggacatcgagatcttccccaccgtcctggtgaagacgctagtggactcgctg
cagaaggacgagcgctcccaggcagaccagcggccagagctcaagcggctcatcttcaag
gtgaagacagacaacgagatggtgctggtccaagctgacgaccacgtgaagaagtttcag
ctccctaaaacccacatgctgcaggaggactttgtgaagcgcatccaggagtctgggatt
gtgaaagacgtcaccaccatccataggttgtttgaggctctcactgtggggcaacagaag
cagattgacccagaggtgttccgtgtgttctacaccttctggaaggagacggaggtggag
gcccaggacgttcacctgccagctgaggtcatagagcacctggacaacaacgagtgtgtc
tacaagctgtcctgctccgtcaaaaccaaccagggagtgggcaagatcgccatgacacag
aagaggctcttcctgctcactgacgggaggcctgggtttatcgagatcaccaagttcaga
gacatagaggaggtgaaaatctcctttgctccgttcctgctgctgaggatcccgtctctg
aagatcaagtgcagtctgaggaaggaggtgtttgaggccaacctgaagtctgagtgtgac
ctgtggaacctcatggtcaaagagatgtgggctgggaggaggatggcagatgtccacaag
gatcctcagtacatgcagcaggctttgactaacgtcctgctcatggatgctgtggttggg
agccttcagacccagaaggccatatttgctgcctccaaactggcatactttgacagagtg
aaacatgaagttcctatgatggttccgaagacgacatcggagacgttgaaacacaagatc
aatccatcgcttgacctcccagctccccagactgtacaggtcttactctacacaccaggc
cagttgagttactcggaggcagacggagatgggaaccccaagctgtggtgtgccctcagt
ggtgggagggtggtcttgtttgatgcagccagctggtccatgcagcagaactgtattcaa
gtgggatcctcccaactgaactgcatgctgggattggaccaggatcaactcttcaatgga
acactgtggtgctgtgccagagacggcatcattgaactgaggaagaacggatccccactt
cgtaagatgacacttcctgaggatctatggagcatgcccactgagttcagcagcctcatc
ctcttcttagagaggggccagttgtggacgagctgttctgattctgatgagctctgtctc
tggcactttaaagacctgaccaagcctttcctgagggtgcagctacagaactgtacaggg
gtcaaccgtatgatcaaggttaagaatcagatctgggttggctgcagagggccgagcccg
gaccagtgcagggtgagtgggaagatctacgtagtggacacagagagccacagtgtggcg
aaggagctgatggcccacacagacagtgtccaggcactgtgctctgccgaggaccgctat
gtactcagcggctccgcctaccaggatggcaaaatcgccatttggaaggtcgagtag
DBGET
integrated database retrieval system
