Coregonus clupeaformis (lake whitefish): 121543980
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Entry
121543980 CDS
T08357
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121543980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543980
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121543980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
DUF4575
Motif
Other DBs
NCBI-GeneID:
121543980
NCBI-ProteinID:
XP_041710039
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All DBs
Position
28:complement(34323681..34339278)
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AA seq
918 aa
AA seq
DB search
MLVVPSPVWLLTVYSMDVLSRLAEVKARVTSVFRSILKMDSTKKVTKKLAGYASDTAAWA
TNVGNEHGHVLNHVLTAGEGEGLMKRYQLAGVPPPQLMYVDRDCCSSFGGSKTASMFPEW
DQLVVRFDIWHLLRRFVAGVTTESHQLYRAFMRFVCSPTTSQGNSLVLSTCTPRPPRDPW
RTSDFRRPVASSSTSVAARSGASSATGCDPPEAPEHQDSPPSDSSSGSEDILFLVSLSFV
YFAKAFGGSYMKSSITQIERRFDIPSSLIGFIDGSFEMGNLLVIAFVSYFGAKLHRPRLI
GIGCLIMAAGAFLTALPHFFQGKYVYETTLSHTPEENTTESILPCLANTSHLVINDQATA
ASKAACEKEAGSSMWIYVFLVNMLRGIGETPVMLLGVSYLDDYARKENNAIYLACLQTVG
ILGPVFGFTFGAFCAKIYVDIGSVNLESISINHKDSRWVGAWWLGFLVSGFLMLLAGIPF
WFLPNTLPKQGKSPSKKKQKEDTQAKNSSDTQEEEQEQGSFLPEDNTEEDAPKPVTMAAM
AKEFGPSLKRLLLNKVYLLIILTSVVAFNGFIGMITFKPKFMEQVYGQSPSKAIFLIGSM
NLPAVGIGVIVGGYVMKRFKLSILGAARLSISSFLSFCLLLIQYFLQCENSEVAGLTMTY
KGAPEVSYQQESLLSQCNMGCSCSLKHWDPVCASNGMTYASPCLAGCQTSIGVGKEMEFH
YCTCMGELKGKMLALPTNMSVILGQCPRKSDCDRMFKFYMAVSVLGAFVSDCGGTSGYIV
LLRSIHPDLKSLALGMQTLIVRTLGGILPPIYFGALIDRTSLKWGLKRCGGQGACRLYDS
HAFRITFLGLIYGLYSLAYLLWGVLYWQLSKRQKKLVLRSQAKATALEANGNNNPNGHAM
VSIFKNKDDLDRDSESTI
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtgccctcacccgtctggctgctgacagtgtacagcatggatgtgctgtcg
cggcttgccgaggtgaaggccagggttacctctgtcttcaggtccatcttaaagatggac
tccacgaagaaggtgaccaagaagctcgccggttatgcttcggacacggctgcctgggcc
acaaacgtggggaatgaacacgggcatgtcctcaaccatgtcctcactgctggtgagggc
gagggccttatgaagcggtaccaactcgctggggtaccacccccccagctcatgtacgtg
gaccgggactgttgctccagctttggcggatcgaagacagcttccatgtttcctgaatgg
gaccagctcgtggttcgttttgacatctggcatctgctgcggcggttcgtagcaggtgtc
accaccgaaagccaccagctgtatagggccttcatgcgctttgtgtgctctcccactaca
tcgcaggggaactcattggtgttgagtacctgtacgcccagaccaccgagggacccttgg
aggacgagtgatttcaggaggccagtcgcctcgtcctccacctctgtggcagcccggtca
ggtgcctcgtccgccaccggctgtgaccctcctgaggcccctgaacaccaggattctcct
ccctctgactcctcctcaggctctgaggacattctgttcctggtttccctgtcctttgtg
tacttcgccaaagccttcgggggaagctacatgaagagttctatcacccagatagagaga
cgcttcgacatcccaagctcactcataggattcatcgatggcagctttgagatgggtaac
ctgctggtgatagcatttgtgagttactttggggcgaagctccacaggcccagactgata
gggattggctgtctcatcatggctgctggggccttcctcaccgctctgccacacttcttc
cagggaaagtatgtatatgaaacaaccctgtcacatacacctgaggaaaacactacagag
agtattctgccttgtctggccaacacgagtcatcttgtcataaatgatcaggctacagct
gcgagtaaagcagcgtgtgagaaggaggcaggctcgtccatgtggatctatgtattcctg
gttaacatgctgcgtgggattggagagacgcctgtcatgcttttaggagtgtcctatctg
gacgactacgcccgaaaggagaacaatgccatctaccttgcgtgtttacagactgttggc
atcctggggcctgtatttggcttcacgtttggcgccttctgtgccaagatatatgtggat
attggctctgtgaatttagagagcatctccatcaaccacaaggactctcgctgggtggga
gcctggtggttaggcttcctggtatctggcttcctgatgctcctggctgggattccattt
tggttcctccccaatactctgcctaagcagggcaagagccccagcaaaaagaaacagaag
gaggacacacaggccaagaactcctctgacacccaagaggaggagcaggagcagggcagt
ttcctaccagaggacaatactgaggaggatgcaccaaagcctgtcaccatggctgccatg
gctaaagaatttgggccgtccctgaaaagactgttgctgaacaaagtttacctgctgatc
atcctgacgtccgtggtggcattcaatggcttcatagggatgatcaccttcaaacccaag
ttcatggagcaggtctacgggcagtctccctccaaggcaatcttcttgataggttcaatg
aacctgcctgcggtgggaattggggtcatcgtgggaggctatgtgatgaagcggttcaag
ctgagtattctgggagcagcccgactctccatctcctccttcctctccttctgcctcctg
ctcatccagtacttcctacagtgtgaaaactcagaggtggctggcctcaccatgacctat
aaaggggctccagaggtgtcttaccagcaggagagcttgctgtctcagtgtaatatgggc
tgctcctgttccctgaaacactgggaccctgtgtgtgccagcaatggcatgacctacgcc
tccccctgtcttgctggctgccagacctccattggcgtaggcaaggagatggagttccat
tactgcacatgtatgggggagctgaaggggaaaatgttggctctaccaaccaacatgtca
gtgatcttgggccagtgccccaggaagagtgactgtgacaggatgtttaagttctacatg
gctgtctctgtcctgggggccttcgtctctgactgtgggggcacatctggatatatcgtc
ctgctcagatctatacaccccgatttaaaatcactggctcttggcatgcagacattgata
gtcagaactctgggtggaatccttcctcctatatactttggagctttgattgacaggacg
tctctgaagtggggtttaaagcgatgtgggggtcaaggagcatgcagactctacgactca
catgcattcagaataacgttcctgggtctgatctatggtctatacagcctggcctacctg
ctgtggggggtgctgtactggcagctgtccaagcggcagaagaagttggtactgcgaagc
caggccaaggctacagccctggaggccaacgggaacaacaatcccaatggacatgccatg
gtcagcatctttaagaacaaagatgatctggacagggacagtgagagcactatctga
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