Coregonus clupeaformis (lake whitefish): 121544270
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Entry
121544270 CDS
T08357
Name
(RefSeq) AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121544270
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544270
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
ARID
121544270
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121544270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
PT
Tudor_2
Motif
Other DBs
NCBI-GeneID:
121544270
NCBI-ProteinID:
XP_045064987
LinkDB
All DBs
Position
29:complement(17784450..17817724)
Genome browser
AA seq
1608 aa
AA seq
DB search
MKAADEPAYLTVGTEVSAKYRGAFCEAKIKTVKRTVKVKVMLKGDTTSQVVQDDQVKGQL
KVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHANDEKDSSSSDDDNEDRRRLNDDLLGKVA
SIQTGTDRTSWYLALVISPSCNDDLTVRKDQCLVRSFADSKFRTVARKEIHEVNMDSVSK
AEFSSRNGLEEAVYFLKTKVVPDSWKMDMSEILESSSSDEEEDKEGEDSEEEEEKEEDDD
EQPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYQQGGCDKIE
SGSVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTIHHNEARPASQ
SSQSQTEHKAAQVLQVTVKDKDKESQGPTPPVQTESVASTEDKPAQEEAESGSESDKEGH
TDISSPRGRRRCTVTPVKAETKEPVKLEKIKEQEPSGLGVGETSGEETGGQRESSRSDGG
DTPGKKCSRRLEESDKESEDEGEDEDSERRVGERAEDEDSEDSVTGTKVKVKYGRGKTQK
IYEANIKKTENDDAGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKNKQKKKVMNKE
DGEKDKQGKLGGLRGRPLLRTTPPSANRSVSKTPSREGRSSSKSKSDSSALPNGEGTPRR
RTRRTSGMYDSDRDANSNEESGNSSEDSESEDSPEKKPAWAERTDPATARKQEEEEDLRV
ERGRAEAVAAAAQAAAQLQPPSSPQEKEQQEDKLPERREPVKEKEEAEEQPQAPPMTPEP
NRPKEEDPPTPKSPRSKAARRSNVREPERNTNNTESETPTNTIITTTPNHTETESSPSPR
PLKRQDEPMVVLHCLPAEHLPSMPDLPIMDSDTDSATEEEICREQRVVAKRKATEHRTPD
KKVRLDWREETAKMGSPERRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPGGR
PHDSPGGRPHDSPGGRPHDSPGGRPPDSPAGRPPESPAGRPPRSPAGRPPESPAGRPPES
PAGRPPESPAGRPTESPAGRPTESPAGRPTESPAGRPTESPAGRPTESPAGGPLSRHGRP
TESPAGRPTESPAGRPTESPAGRPTESPAGRPTESPAGRPTESPAGRPTESPAGRPTESP
AGRPTESPAGRPTESPAGRPTTPEQRLEAGGQKGEECLTPVTGKTEPEVKTEMPALTPEV
QCRGPGEGGITGGWPRSEQPGSGAEEELMPQIGPEALVCHEVDLDDLDEKDKTSAEDLLM
MMSQGKVHAPPPSNASSHHPQTHNNPPPSSGGAAAPRVFSPTSAPSPDESISTKSESDVT
IEVDSVAGESQEGLGDNESANSNCFEASTSSSNSSMSLQERDTKDRGQKRLMDCNMSSSA
KKQKRNQKRPTTTSKMEKNGAEYSSDSEDLAVMDPSCKMTPVKHSMSKGSLKLVSPNSKE
LEKDKHKHKQSSFPSPRTYKWTFQLNELDSMSSAERISFLQDKLQDIRKYYMSLKSEVAS
IDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcggacgagcctgcctacctgaccgtggggactgaggtcagcgccaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggacagtgaaggttaaggtg
atgctcaaaggagacaccacttcacaagttgttcaagatgaccaagtgaaaggacagttg
aaggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaactcacagatgccagttggtacacagtggtgtttgacgatggggatgagaagaca
ctccgcaggacgtctctgtgtctgaagggagagagacattttgctgagagcgagacattg
gaccaactgcccctgaccaacccggagcactttggcacccccgtcatcgggaagaaggga
aaccgcggaggaaggaggtcatctcaggctcatgcgaatgatgaaaaggactcgtcctcc
agtgatgacgacaatgaggacaggaggaggctaaacgatgacctgctgggtaaagtggcc
agtattcagactgggacagaccggacatcctggtacctggccctggtgatatcacccagc
tgcaacgatgacctgacagtcaggaaagaccaatgtttagtgagatcatttgcagactcc
aaatttcgcacggtggcaagaaaggagatccatgaagtgaacatggatagcgtatctaaa
gctgagttctcgtcgaggaatggtttggaggaggcagtgtatttcctcaaaaccaaggtg
gtccctgacagttggaagatggacatgagcgagatcttagaatcctccagcagtgatgag
gaggaggacaaggaaggagaagatagtgaggaggaggaggagaaggaggaggatgacgac
gagcagcctgaggacgaggcggacccagaggagagggatcacttcctgcagcagctgtat
aagttcatggaggatcgagggacgccaattaacaagcctcctgtgctcggctacaaggat
ctgaacctcttcaagctcttcaggctagtctaccagcaggggggctgtgacaaaattgaa
agtggatctgtgtggaaacaaatctacatggacctgggcattcccatcctaaactctgct
gcctcctacaatgtgaagactgcctacagaaagtacctgtatggctttgaggagtactgc
cgctcagcctgcatcgtgttcaggaccatccaccacaacgaggctcgtccagcctcccag
tcctcccagtcccagacagagcataaggctgcccaggtccttcaggtaacggtgaaggac
aaagacaaggagagccagggtccaacaccacccgtccagactgagtctgtggcatccaca
gaggacaagcctgcccaggaggaggctgagtcggggagtgagagtgacaaagagggccac
acagatatctcctctcccagggggaggagacggtgcactgtgaccccggtcaaagctgag
acgaaggaacctgtcaagctggagaagatcaaagagcaggagccgagtggtctgggtgtg
ggggagaccagcggagaggagacgggaggtcaaagagaaagcagcaggtcagacggaggg
gacaccccggggaagaaatgcagccgacgcctggaggagtccgataaagagtctgaggac
gaaggggaagatgaggacagcgagaggagagttggagaacgggctgaggacgaggactca
gaagactctgtgacagggactaaggtgaaggtgaagtacggccgagggaagacccagaag
atatacgaggccaacatcaagaagactgagaacgatgatgccggagatgtcctgtacctg
gtccactactatggctggaacgtcaggtatgatgagtgggtcaaagcagaccggattatc
tggcctgtcgacaagggcggaacaaaaaataaacagaaaaagaaagtcatgaacaaagaa
gatggagagaaggacaagcaggggaagctgggtgggttgagaggtcgccctcttctcaga
accactccccccagtgccaaccgcagcgtctccaagacccccagccgtgaggggcgctcc
agcagcaagagcaaatctgactcatcagccctgcccaacggagagggtacccctcgccga
cgcacaagaagaacctctgggatgtatgactcggacagggatgccaactccaatgaagag
tcagggaattcgtccgaggacagtgagtcagaggattctcctgagaagaagcctgcatgg
gcggagagaacggaccccgccacggcccgtaagcaggaagaggaggaggacctgagggtg
gagagaggaagagcagaggcagtggccgccgcagcccaagcagcagcacagctccagccc
cccagcagccctcaggagaaggagcagcaggaggacaaactccctgagaggagggagcct
gtgaaggagaaagaggaggctgaggagcagccccaggcgccccccatgacccctgaaccc
aacagacccaaggaagaggacccccctaccccgaaatcccccaggtctaaagcagcacgt
agaagtaacgttagagagccagagaggaacaccaacaacactgagtctgaaacacccacc
aacaccatcatcaccaccactcccaaccacactgagacagagtcgtcccccagcccacgc
cccctgaagaggcaggatgagcccatggtggtccttcactgtctccctgctgagcaccta
cccagcatgcccgacctccccatcatggactccgacacagactccgccacggaggaggag
atttgcagggagcagcgagtcgtggccaagcgtaaagccacagagcacaggacgccagac
aagaaggtgcgtctagactggagggaggagactgccaaaatgggatcgcctgagaggagg
ccccatgattcgcctggggggaggccccatgattcgcctggggggaggccccatgattcg
cctggggggaggccccatgattcgcctggggggaggccccatgattcgcctggggggagg
ccccatgattcgcctggggggaggccccatgattcgcctggggggaggccccatgattcg
cctggggggaggccccctgattcgccagcggggaggccccctgagtcgccagcggggagg
ccccctaggtcgccagcgggaaggccccctgagtcgccagcggggaggccccctgagtcg
ccagcggggaggccccctgagtcgccagcgggcaggcccactgagtcgccagcgggcagg
cccactgagtcgccagcgggcaggcccactgagtcgccagcgggcaggcccactgagtcg
ccagcgggcaggcccactgagtcgccagcgggaggcccactgagtcgccacgggaggccc
actgagtcgccagcggggaggcccactgagtcgccagcggggaggcccactgagtcgcca
gcggggaggcccactgagtcgccagcggggaggcccactgagtcgccagcggggaggccc
actgagtcgccagcggggaggcccactgagtcgccagcggggaggcccactgagtcgcca
gcggggaggcccactgagtcgccagcggggaggcccactgagtcgccagccgggaggccc
acgactccagagcagaggctggaggcggggggacagaaaggagaagagtgcctgacgcca
gtgacgggtaaaacggagccggaggttaaaacagagatgcctgccctcactcctgaggtg
cagtgtcgaggtccaggagagggaggtatcacaggaggttggcccaggtcggagcagcca
ggctcgggggcagaggaggagctgatgccccagatagggcctgaggcgctggtctgccac
gaggtggatctggacgacctggatgagaaggacaagacctcagcagaagacctcctaatg
atgatgagtcaggggaaggtacatgctccccctccgtccaatgcctcctcccaccacccc
cagacccacaacaaccctcctccgtcctccgggggcgctgctgctccacgagtcttctcc
cccacctcggcccccagccctgatgagtccatcagcaccaagagtgagagtgacgtcacc
atcgaggttgacagcgtagccggggagtctcaggaggggcttggtgataacgagtcggcc
aactccaactgctttgaagccagcaccagctctagcaactccagcatgtcactacaggag
agggacaccaaggacagaggtcagaaaaggttgatggactgcaatatgagttcttctgca
aagaagcagaagcgcaaccagaaacggccaaccacaacgtccaaaatggagaagaacgga
gcagagtacagcagtgacagtgaggacctggctgtcatggacccctcctgtaagatgact
cctgtgaaacactccatgtctaaaggaagcctgaagctggtctctcctaacagtaaggag
ttagagaaggacaagcacaaacacaagcagtcctccttcccctccccgcgcacatacaag
tggacctttcagctcaatgaactggacagcatgtcaagtgctgagaggatatccttctta
caagacaaactacaggatataaggaagtactacatgtcactcaagtctgaagtggcctcc
atagacaggaggaggaagaggttaaagaagaaagaaagagaggtgtcccacaccacagct
tcaacgtcgtctggctcgtcagacactgggatgagcccctcctccgcctcacccactcag
aacactgtggctgtcgagtgcaggtga
DBGET
integrated database retrieval system
