Coregonus clupeaformis (lake whitefish): 121544287
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Entry
121544287 CDS
T08357
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00562
Inositol phosphate metabolism
cclu01100
Metabolic pathways
cclu04020
Calcium signaling pathway
cclu04070
Phosphatidylinositol signaling system
cclu04081
Hormone signaling
cclu04082
Neuroactive ligand signaling
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
cclu04310
Wnt signaling pathway
cclu04371
Apelin signaling pathway
cclu04540
Gap junction
cclu04621
NOD-like receptor signaling pathway
cclu04912
GnRH signaling pathway
cclu04916
Melanogenesis
Module
cclu_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121544287
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121544287
04371 Apelin signaling pathway
121544287
04020 Calcium signaling pathway
121544287
04070 Phosphatidylinositol signaling system
121544287
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121544287
04081 Hormone signaling
121544287
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121544287
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121544287
09152 Endocrine system
04912 GnRH signaling pathway
121544287
04916 Melanogenesis
121544287
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121544287
04270 Vascular smooth muscle contraction
121544287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544287
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
121544287
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121544287
Endocytosis
Macropinocytosis
Phospholipase C
121544287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
CitG
DUF4277
Motif
Other DBs
NCBI-GeneID:
121544287
NCBI-ProteinID:
XP_045065056
LinkDB
All DBs
Position
29:20529652..20543190
Genome browser
AA seq
1201 aa
AA seq
DB search
MAGAQPGTHALKLKSPTVPDTLKNGSRFMKWDDDLSTVTPITLTVDPHGYFLHWTDQNKE
TEFLDITHIKDARTGKSTKTPKEAKLRELLDVGNLVGRIENRLLTVVTGPDMVNITYLNF
MALQEEEATEWAEELFSLASNLLSHNMNRETSLEKAYVRLTLQPNSEGRIPVKNIVRMFS
ADKKRVETALEHCNLPFGRSNSIPLEDFTPDIYRSFLSHLCPRPELSSIFSQQGAKGAYL
SVDQMTEFINERQRDPRLNEILYPPLRPSQTQTLMEKYELNQSLLKQGLITLEGLSRYLV
SDENGVIPPEKLDQSEDMTFPLSHYFINSSHNTYLTAGQLAGSSSVEMYRQVMLAGCRCV
ELDCWKGRTAEEEPVITHGFTMTSEICFKEVIEAIAECAFKTSPFPVILSFENHVDSPKQ
QAKMAEYCRSIFGDALLIDPLEKYPLESGVPLPSPQELMGKILIKNKKSHKPSAAHGNNR
LAGQPANQSAAEEQATDEPSSPSNITVGEIEAEDDDDDDDDDDDCKKTSDEGTAEEREAV
ATEEMSTLVNYVQPTKFNSFEASKKVNRSYQMSSFVETKALEHLTKSPVEFVEYNKQQLS
RIYPKGTRVDSSNYMPQLFWNAGCQLVALNFQTIDLSMQLNLGMYEYNGKSGYRLKPEFM
RRPDKHFDPFAESTVDGIVANTVKVKIISGQFLSDKKVGVYVELDMFGLPVDTRRKALKT
KTSQSNAINPVWDEEPIIFKKVVLPTLASLRIAAFEEGGKFIGHRIIPVPAIRPGYRYIG
LRNEKNQSLILPAVFVYIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSQQLAALTLEEG
EEETSKEVEANADQPGLAEPKANLRSAPLENGLRPSPTITPRTPTNTPQPAATVVSEPTK
PAAKTEDMVQSVLIDMEAATLEELRQQKLIVREQKRHYREMKDVVKRHQKKTLEMVKEQT
TKYNQAQNQHTRRHNALLKTKQHGKTRSLSPGGKAELKQFDEEGEGQLGELREQQQQQLL
ELRQEQYYSEKYLKREHIKQLSEKLTTVTEESQNNQMKKLKDICDKEQKDLKKKMDKRRT
KKIKEAMTKEKHLAEEEKLEINKSYVNEVVQNIKRLEDAQAKRQERLVEQHKDIQQQILD
EKPKLQGAVEAEYQEKFHLLPGEIQDFLQNRKGGVKGLVGPRPSTPHDMLSEEELEDDRR
E
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctcagccagggacacatgctctgaagctcaaatcaccgaccgtccccgat
actctgaagaatggcagccgcttcatgaaatgggacgatgatctctcgacagtgactccc
attaccctgactgtggatccacacggatacttccttcactggaccgatcagaacaaggag
acagagtttttagacatcacccatataaaggatgccagaacagggaagagcaccaaaaca
ccaaaggaggcgaagctgcgtgagctgcttgatgtggggaacctggttggtcgtatagag
aaccgtctgttgaccgtagtcacaggaccggacatggtcaacatcacgtacctcaacttc
atggccctgcaagaggaggaggccacggagtgggctgaggagctgttctctctggcctcc
aacctgctgagtcacaacatgaacagagaaaccagtctggagaaagcgtacgtcagactg
accttgcagccaaactcagaggggcggatcccagtgaagaacatcgtccgcatgttctca
gcagacaaaaagagagtggagacggccttggaacactgcaacctaccctttggacggagc
aactctattccccttgaggacttcacccctgacatttacagatcattcctctcccacctc
tgtcctcggccagaactcagctcaatcttctctcagcagggtgctaagggtgcttacctg
tctgtggatcagatgacagagtttattaatgagaggcagagagatcctcgtctgaatgag
attctgtatcctcctctcagaccctctcagacacagaccctgatggagaaatatgaactc
aaccagagcctgctcaaacaaggcctgatcacgttggaggggctcagcagatacctggtg
tctgatgagaatggagtgattcctcctgagaaactggaccagtctgaagacatgaccttc
cctctgtctcactacttcatcaactcctcacacaacacctacctcacagctgggcagctg
gcaggaagttcatcagtggagatgtaccgtcaggtgatgttggcaggctgtcgctgtgtg
gagttggactgttggaaaggacggaccgcagaggaggaaccagtcatcacacacggcttc
accatgacctcagagatctgctttaaggaggtgattgaagccatcgctgagtgtgctttt
aaaacctctccttttcctgtcatcctgtcctttgaaaaccatgtggactcgccaaagcaa
caagccaagatggcagaatattgtaggtcgatttttggagatgcactactgatagaccca
ctggagaaatatcctctggagtctggggtacccctgccaagtcctcaggagctgatgggt
aagatcctcatcaagaacaagaaatcccacaagccctcggctgcccatggcaacaaccga
ctagcagggcagccagccaaccagagcgcagcagaagaacaggcgacagatgaaccctcg
tctcctagcaacatcacagttggagaaatagaggctgaagacgatgacgatgacgatgat
gatgacgatgactgtaagaagacgtcagatgaagggacagcagaggaacgggaggccgta
gccacagaggagatgtccactctggtcaactacgtccagcccaccaagttcaactctttc
gaggcttccaaaaaggttaatcgtagctatcaaatgtcatcatttgtggagactaaagct
ctggagcacctcaccaagtcgcccgtggagtttgtggaatataacaagcagcagttgagt
cgtatctaccctaaaggcacgagggtggactcctccaactacatgccacaactcttctgg
aatgctggctgccagctggtggcactcaacttccaaactatagacctgtctatgcagttg
aacctgggcatgtatgagtacaatgggaagagcggctacagactgaaaccagagttcatg
agaagaccagacaaacactttgacccgttcgctgagagcaccgtggacggcatagtggcc
aacactgtcaaggtcaagataatctcaggccagtttctgagcgacaagaaggtaggtgtg
tacgtagagctggacatgtttggtcttcctgtggacaccaggagaaaagccctgaagacc
aagacgtcccagagcaacgctatcaatccagtctgggacgaagagccaattatcttcaag
aaggtggttctccccacgttggcctctctgagaattgctgcgtttgaagaaggaggaaag
ttcataggtcaccgtattatccctgtgccagccatacggccaggttatcgctacattggc
ctgaggaatgagaagaaccagtctctgattctgcctgctgtgtttgtctacattgaagtg
aaagactatgtcccagacacctttgcagatgtaatcgaggcgctgtctaaccccatccga
tatgtgaatctcttggagcagcggtcccagcagctggctgctctcactctggaagaaggg
gaggaggagacaagcaaagaggttgaggctaatgctgatcagcccgggcttgctgagcca
aaagccaacctacgatctgctcctttggagaacggtctcaggcccagccctaccatcaca
cccaggactccgactaatacaccccagcctgcagctacagttgtttcagaaccaaccaaa
ccagcagcgaagactgaagacatggtgcagagcgttctgatagatatggaggcggccaca
ctagaggagctcaggcaacagaagctgatagtgcgggagcagaagagacactacagggag
atgaaggatgtggtgaagagacaccagaagaagactttggagatggtgaaggaacagacc
accaagtacaaccaggctcagaaccaacacacacgcagacacaacgctctactgaagact
aaacaacatggtaagacaagaagtttgtcacccggagggaaggctgaactgaagcagttt
gatgaggagggagaggggcaactgggggagctgagagaacaacaacagcaacagctactg
gagctgagacaggaacaatactacagtgagaaatacctcaaacgagaacacatcaaacag
ctgagtgagaaactgactacggtgactgaggaaagccagaacaaccagatgaagaaatta
aaagacatctgtgacaaagaacagaaagacctgaaaaagaaaatggacaagaggagaaca
aagaaaattaaagaagctatgacaaaagagaagcacttggcggaagaggagaagttggag
atcaacaaatcatatgtgaatgaagtggtacagaacatcaagaggctggaggatgcccag
gcaaaacgccaagagagactggtggagcagcacaaagacatccagcagcagattcttgat
gagaaaccaaagctgcagggtgcagtggaggcggagtaccaggagaagttccatctgttg
ccgggggagatccaggacttcctgcagaataggaaaggaggggtcaaaggtctagtcggg
ccccgcccctccaccccccatgacatgctctctgaggaggaactagaggatgaccggagg
gagtga
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integrated database retrieval system
