Coregonus clupeaformis (lake whitefish): 121544295
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Entry
121544295 CDS
T08357
Name
(RefSeq) vacuolar protein 8-like isoform X1
KO
K08332
vacuolar protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544295
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121544295
Membrane trafficking [BR:
cclu04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
121544295
Other autophagy associated proteins
Micronucleophagy
121544295
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121544295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
V-ATPase_H_N
Cnd1
ZER1-like_2nd
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
121544295
NCBI-ProteinID:
XP_041710141
LinkDB
All DBs
Position
29:complement(8515996..8522850)
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AA seq
532 aa
AA seq
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MATGICEKCAQLLKDFVVYVKRLPSEFVQKITDCIKDLSRCSCLRKKRATSASYISEQHE
RQAARALLNHLDTVDYPLPVALLEPYTTLLLSNDLEVQRITTRSLVHLLVKNKVSKEQVI
ETGLLMPLLEMLQSGDPTVQCNSCQCVASLASSDSNREAIVSADGVIPLLVSAKSYDPRV
QQNAVWALLNLTQSERTMRVLCQEGAIPLLALLLQSSNYEVQFYSCSALSNIATVPDHHP
KMLGIGDRFLLKSLLTLMSSSVQKNASQACRCLQILSGNVVTQEQLMHLDCVLPLKALLC
SPTPPLTESAIALLSGLATHQPNREGLVSEGLVQVIGQLLLCHRSSSIINHSVVIITNLS
STSEGQQAVMDSECLTGLLKALVSSVTSEETVLCVTSCLHHLTSWDLLQSHLATKITPEH
VSSLVKFSAQMDNPELSYRSASIISKLKMNDHVIQLLKPHYAAISEYILMYLKNQEVRFQ
QLSIVTLCNLKKDGEFSVVMSGGVLEEQLKRVHAQTEQTRQLLQMIQIPPSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccactggaatatgtgaaaagtgtgcacaactgctgaaggacttcgttgtttatgtg
aagagattgccatctgaatttgtacagaagataacggattgtataaaggacctgtcaaga
tgcagctgtctgcggaagaagagagcaacttctgcatcctatatctcagagcagcacgag
agacaggctgctcgtgcactactgaaccacctggacacagtggattatcctctacctgtt
gctctcctggagccatacacaaccctactgctctctaatgatctggaggtacagaggatc
accactcggtctctggttcatctgctagtgaagaacaaagtgagtaaggagcaggtgatt
gagacagggttgctgatgcccctgctagagatgctccagtctggggaccccactgtccag
tgtaactcctgtcaatgtgttgcctcactggcctcctcagactcaaaccgggaagctatc
gtgtcagctgatggggtgattccactactggtttcagccaagtcttacgatcctcgagtc
caacagaatgcagtctgggcccttttaaacctcacacagtctgagaggacgatgagagtg
ttatgtcaagaaggagccattcctttactggcacttctgttgcagtcctccaactatgag
gtccagttctacagctgctctgccctgagcaatatagccactgtcccggaccatcatcca
aagatgttgggcattggagaccgttttctgttgaagtctctactgacactcatgtcctca
tcagtgcagaagaatgcatcccaagcttgcagatgcctccaaatcctttcagggaatgtt
gtgacccaggagcagctgatgcacttggactgtgtgttgcctctgaaagccctgctgtgt
tcccctactccccctctgactgagtctgccatagctctactgtctgggctagccacacac
caacccaatagagagggcctggtgagtgagggcctggttcaggtgatagggcagctgctc
ctctgtcacagatccagctccatcatcaaccacagtgttgttatcatcaccaacctgagc
agcaccagcgagggacagcaggctgttatggacagtgagtgtttaacaggacttctcaag
gcccttgtgtccagtgtgacctcagaggagaccgttctgtgcgtcacttcctgtttacat
cacctgacaagctgggacttacttcaatctcatttggccacaaagattactcctgaacat
gtttcaagtctggtgaagttctctgcacaaatggacaatccagagttgtcctataggtct
gcttccatcatcagcaaactaaagatgaacgaccatgtcatccaactactgaaaccacac
tatgctgccatctctgaatatatcctgatgtacctcaagaaccaggaagtgagattccaa
cagctgagtattgttactctatgcaacctcaagaaagacggagagttttcagtggtgatg
agtggtggtgtgctggaggagcagctgaagagggtgcatgcacagactgagcagaccagg
cagttactgcagatgattcagatacctccatcctcctga
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