Coregonus clupeaformis (lake whitefish): 121544310
Help
Entry
121544310 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121544310
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121544310
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121544310
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544310
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121544310
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121544310
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121544310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
121544310
NCBI-ProteinID:
XP_041710165
LinkDB
All DBs
Position
3:complement(29591893..29611141)
Genome browser
AA seq
452 aa
AA seq
DB search
MLNPIQVLSSDITSLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREPE
CKTEPYSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRIKDLSTVTSLQVPVLKPMDLMVEVSPRRVFANAHTYHV
NSISVNSDHETYMSADDLRINLWHLGITDRSFNIVDIKPVNMEDLTEVITAAEFHPHHCN
LLVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMENKPLEIYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCQGGKRRKDDISVDSLDFTKKIL
HTAWHPTENIIAIAATNNLYIFQDKLNQEMHG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccccatccaggtcctgtcctccgacatcacttccctctctctggagcccgag
ccgtttgcctcttacactgaagctgatatcatctccactgtagagttcaaccacactgga
gagctcctggccacaggggataagggggggcgagtggtcatcttccagagggaacctgag
tgtaagacagagccgtactcccagggagagtacaatgtctacagcacgttccagagccat
gagccggagtttgactacctgaagagtctggagatcgaggagaagatcaacaagatacga
tggctgcctcagcagaacgccgcccacttcctcctttccaccaatgataagaccattaag
ctgtggaaggtgagtgagcgggacaagaggcctgaaggctacaacctgaaggatgaagag
ggcaggataaaggacctctccaccgtcacctcactacaggtgccggtgttgaagcccatg
gatctgatggtggaagtgagccctcggcgtgtgtttgccaacgcccacacctaccacgtc
aactccatctccgtcaactccgaccacgagacctacatgtcagctgacgacctgaggatc
aacctctggcacctgggcatcaccgaccgcagcttcaacatcgtggacatcaagccagtg
aacatggaggatctgacagaggtgataacagcagcagagttccaccctcaccactgtaac
ctgttggtctacagcagcagtaagggaactctacggctctgtgacatgagagaggccgca
ctgtgtgacaaacactccaaactgtttgaggagccggaggaccccagtaaccgctccttc
ttctcggaaatcatctcgtctgtgtcggatgtcaagttcagccacagcgggcgctacctg
ctgaccagagactacctcaccgccaaggtgtgggacctcaacatggagaacaagcccctg
gagatataccaggtgcatgattacctccgcagcaagctgtgctccctctatgagaacgac
tgcatcttcgacaagtttgagtgtgcctggaacggctcagacagtgtgatcatgacgggg
gcctacaacaacttcttccggatgtttgaccggaacaccaagcgtgacgtgaccctggag
gcgtccagggagagcagtaagccccgggcagttctcaagcctcgccgcgtctgccagggt
gggaaacgccgcaaggatgacatcagcgtggacagcctggacttcaccaagaagatcctg
cacacggcctggcaccctacggagaacatcatcgccatcgctgccaccaacaacctgtac
atcttccaggacaaactcaaccaggagatgcatggctga
DBGET
integrated database retrieval system
