Coregonus clupeaformis (lake whitefish): 121544313
Help
Entry
121544313 CDS
T08357
Name
(RefSeq) somatostatin receptor type 1-like
KO
K04217
somatostatin receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121544313
04081 Hormone signaling
121544313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121544313
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Somatostatin
121544313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
TrbL_3
T2SSM
Motif
Other DBs
NCBI-GeneID:
121544313
NCBI-ProteinID:
XP_041710164
LinkDB
All DBs
Position
29:17971881..17973219
Genome browser
AA seq
368 aa
AA seq
DB search
MLLNSSFRNLTLEDGFSPINNSSGNGTYSESHGSAILISFIYSVVCLVGLCGNSMVIYVI
FRYAKMKTATNIYILNLAIADELLMLSVPFLVTSSLLHHWPFGSLLCRLVLSVDAINMFT
SIYCLTVLSIDRYIAVVHPIKASRYRRPTIAKIVNFGVWMFSILVILPIIIFSTTVPNLD
GSLACNIQMPEPVNQWMAVFVIYAFLMGFLFPVIAICMCYILIIAKMRVVAMKAGWQQRK
KSERKITLMVLMVVTVFVICWMPFHIVQLVNVFVEHHNATLMQLAVILGYANSCANPILY
GFLSDNFKRSFQRILCLRWMDNATEESIDYYATALKSRGYSVDEFQPDNMECDSTYRNGI
CTSRTTTL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctccttaacagctctttcaggaatctaacactggaggacgggttttccccaataaac
aactcgtctgggaacggaacgtacagcgagtctcacggcagcgctatcctcatctccttc
atttactccgttgtctgtttggtcggactatgcgggaactctatggttatctatgtcatt
ttcagatatgccaaaatgaaaacggcaacaaatatttacattctgaacttggccatcgcg
gacgagttacttatgctgagtgtccccttcttggtgacatcttcactccttcatcactgg
cctttcggctcccttctctgccgacttgttctaagtgttgacgctattaatatgtttacg
agtatttactgcttaactgtacttagcatagaccgatatattgcggttgtgcaccccatc
aaagcctcccggtacaggagacccacaatagctaaaatagtcaactttggggtttggatg
ttttctatcctggtaattttgcccattattatattttccacgaccgttccaaacttggac
ggttcgctcgcttgcaacattcagatgccagagccagtgaaccagtggatggctgtgttt
gtgatttatgcctttctcatgggctttctgttcccagtcattgcgatctgtatgtgttac
atcctcatcatcgccaagatgagagtggtggcaatgaaggcaggctggcagcagcgtaag
aagtcggagagaaagatcactctgatggtgttgatggtggtgactgtgtttgtcatctgt
tggatgccctttcacattgtgcagctcgttaatgtctttgtggagcaccataacgcaaca
ctcatgcaactcgcagtgattttggggtacgcaaacagctgcgccaatcctatactgtat
ggatttttatcagacaatttcaaacgttcgttccaaagaattttgtgcctgcggtggatg
gacaatgcaacggaggaatcaatagattactatgccacggctctgaaaagtcgtggttac
agtgtggatgaatttcaaccggacaacatggaatgtgacagcacttatagaaatggaatc
tgcacttcgaggacaacgacactgtag
DBGET
integrated database retrieval system
