Coregonus clupeaformis (lake whitefish): 121544358
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Entry
121544358 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121544358
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121544358
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121544358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121544358
NCBI-ProteinID:
XP_041710223
LinkDB
All DBs
Position
3:complement(29690309..29703613)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSGQKRLCDSSVPSSSSSASPEKRRGQEGGEDGGPGVSSTAGGTTAVETVIKLGGVSNSE
EQDVKALQVKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDDNV
CLIGRRYDESGSESVETPAGEGRSLKPDTPEPDGDSNQERVKDRGHQGETTTSFLATLAS
SSSEEMEAELQERVESSQKQANRVVVIYDSLKTTVEQLKKDQDSGAEGSVWQVAAQLNTL
LSNENDRLRHLTEDLQQKHSHMTSESRSLGWAVARADTRVNELQGLIEALQWDMEKIRRR
ENRLNTHLGEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSE
LQRLQLDLQTVNQENSNMKVSLQSLTQGLGHQNPMALSPNPAIGLPEVPRPYSANQTSQM
KVELLSRAEGVVRESSEYRCLQSQFSVLYNESVGLKSQLDETRTRLNTTKTARLRQLEHM
ENDEVSLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISTL
QTHNQHMKGEVVKYKLRLREAQTNLSQARTKKGSAILQSQSSTELDVKVETTSPLTPAAS
ADVTIKVESDNGSATPTSTSTSVKTEPGTETEGEIKEKEKEREREGERPTRGRGGTEEKE
KAGTSNQSEEVAPERPSVIGGPKRKEVEQLKIVGAELKKAQESQREMKLLLDMYRSAPKE
QRDKVQLMAAEKKAKSEAEELKQRLRDLEERERREGKKMADEEALRKIRSVEEQINILNK
KLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKL
LKEEKEELADQLLTLKTQVDAQLQVVKKLEEKERLLQGTIGTAERELALRTQALDMNKRK
TQESAVLSDEVCSQLDQVQQRLGTVREEVIENSISKEKQSFNARRAQEDISKLRRKIEKA
KKPAETVRNGDDILNEEINDYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQR
KCPKCNAAFGANDFHRIYIG
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtctgtgtgactccagcgtcccctcttcctcgtccagtgcgtcc
cctgagaaacggagggggcaagagggaggagaggatgggggtccaggggtcagctctact
gcaggagggaccactgctgtggaaacagtcatcaaactcggaggggtttccaactcggag
gaacaggatgtcaaagctctccaggtgaagaacaggaagttgggagaatcgctcgatcag
agacaggtgattgaggatgagctgagagagaggatcgagagactggagactcgtcaagca
actgatgacgccagcctactgatcctgaacagatactggaatcagtttgatgacaatgtg
tgcctgattggaaggcgctacgatgagtcaggaagcgagtctgtggaaaccccggctgga
gaggggcggagcctgaagcctgacaccccagaacctgacggcgactccaaccaggagaga
gtcaaagacagaggccaccagggggagacgaccacatccttcctggccacactggccagc
agcagcagcgaggagatggaggcagagctgcaggagagggtggagtccagccagaagcag
gccaaccgcgtggtggtgatctacgacagcctgaagaccaccgtggagcagctaaagaag
gaccaggactctggagcagagggctccgtgtggcaggtcgccgcccagctcaacaccctc
ctgtccaatgagaacgaccggctgcgtcatctgactgaggaccttcagcagaagcacagt
cacatgactagcgagtctcgttctctgggctgggcagtggcgagggcagacacgcgggtc
aatgagctgcagggcctcatcgaggcgctccagtgggacatggagaagatccgacgcaga
gagaaccgcctcaacacacacctgggagaaatcctggagagggtgaacagtaaaggctac
aaggtgtgtggggaggccagcagtgtgtgtggaaccattaccatcaacaagagaaagttt
gaggagatgaacagtgagttggaggagaacagggagctggcggagaaccgtctgagcgag
ctgcagcggctgcagctggacctgcagacggtcaaccaggagaacagcaacatgaaggtg
agcctgcagagcctgacccagggcctgggccaccagaatcctatggctctctcccccaac
ccagccattggattacctgaggtcccacgtccttactcagccaaccaaaccagtcaaatg
aaggtggagttgttgagtcgtgctgagggggtggtgagggagagctcagagtaccgctgt
ctccagtcccagttctctgtcctctacaacgagtctgtgggcctcaagtctcagctggac
gagacgcgcacgcgcctcaacaccaccaagacggcacgcctccgacagctagaacacatg
gagaatgacgaggtgtctctccagaggaaggtgcgtactgaggtgttccagctagaggac
actctggcccaggtcaggaaggagtacgagatgctcaggatcgaatttgaacagaccctc
gctgccaatgaacaagcaggtcctatcaacagggagatgcgtcacctgatcagcaccctg
cagacacacaaccagcatatgaagggagaggtggtgaaatacaaactgagactgagagag
gcacagactaacctcagccaggctcgtactaagaagggcagtgctatcctccaatcacaa
tccagtacggagctggacgtgaaggtagagaccacctcccccctgacgcccgctgcctct
gctgatgtcaccatcaaggtggagtctgacaacggttcagccacacccaccagcactagt
acctcagtgaagacagagcctgggacagagacagagggagaaatcaaagagaaggaaaag
gaacgagagagggagggagagaggccaacacgtggaaggggtgggaccgaggagaaggag
aaggctgggaccagcaaccaatcggaggaggttgctccggagcgcccttctgtgattgga
ggaccaaagaggaaggaggtggagcaactgaaaattgtcggggcggagctgaagaaagcc
caggagtctcagagggagatgaagctactgttggatatgtaccgctctgcacccaaagag
cagagggacaaagtccagctcatggccgctgagaagaaggccaagtcagaagcggaggag
ctgaagcagcgtctaagggatctggaggagagggagaggagggaggggaagaagatggcc
gatgaggaggcactgaggaagatccgctctgtcgaggaacaaatcaacatcctcaacaag
aagctctccctggccaagcaggaggaggatgcgttgctgagtgagatggacgtgacgggc
caggcctttgaggacatgcaggagcagaacatccggctgatgcagcagctcagggagaag
gacgacgccaacttcaaactgatgtcggaacgcatcaagtccaaccagatccacaagctg
ctcaaggaagagaaggaggagcttgccgaccagctgctcacgctcaaaacgcaggtggat
gcccagctgcaggtggtgaagaagctggaggagaaggagcgcctcctccagggcaccatc
ggtactgcagagagagagctggctctgagaacacaagcactggacatgaacaaacgcaag
acccaggagtcagcggtgctgtcggacgaggtgtgtagtcagctggaccaggtgcagcag
agactgggtaccgtcagggaggaggtcatagagaacagcatctccaaagagaagcagtcc
ttcaatgcacgccgcgcacaggaggacatctccaaactgcggaggaagattgagaaggcc
aagaaacctgccgagaccgtccgcaacggagacgacatcctcaatgaggaaatcaacgat
tacaaggcgcgtctgacctgcccgtgctgcaactcccgggtaaaggacgccgtcctgacc
aagtgtttccacgtcttctgcttcgagtgcgtcaagacgcgctacgacacgcgccagagg
aagtgccccaagtgcaacgccgccttcggcgccaacgacttccaccgcatctacatcgga
tag
DBGET
integrated database retrieval system
