Coregonus clupeaformis (lake whitefish): 121544379
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Entry
121544379 CDS
T08357
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00564
Glycerophospholipid metabolism
cclu00565
Ether lipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121544379
00565 Ether lipid metabolism
121544379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544379
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121544379
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121544379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
P116
Motif
Other DBs
NCBI-GeneID:
121544379
NCBI-ProteinID:
XP_041710246
LinkDB
All DBs
Position
29:27168618..27172011
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AA seq
519 aa
AA seq
DB search
MLFKCMFKMIFMINNILGLDFNRMLGTSVPEMSSPYKTLHDSYVPNRSSSKQLVSIAVVV
GCLTALGALLSFSILDKCTEEEHFQNDKLFQETRTDQNNISDEQSRIILVESIPLYMKYD
DNATFGTPVDKAWRDLLSMATNQVDVASFYWTLTGDDINMNSSTDLPGKDILEQLGALPS
RNVSVRVVTSIPSMLTNSTDLQVLRQKGVQVRKVHFGRLTGGVLHSKFWIVDRRHIFLGS
ANMDWRALTQVKELGVVIYNCSSLAEDLHKIFESYWVMGHHNSSIPDPWPSKYDTAINKE
HPLLLKTDNVSSKIYITGSPPSFCPTSRTQDLNAILSVISGAQHFIDVAVMEYFPTTRFI
HPQRYWPAIDDALKRAAFERNVKVRLLVSCGRDSDPAMLPFLQSLASLNYPAQNISIQVK
LSIVPVGNQSEIPHSRVNHNKYMVTDKVAYIGTSNWSADYFNTTAGVGLVVSQHTPNWPW
GTQALQGQLRAVFDRDWHSQFTVCFADLGHHLDCALSKG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttaaatgtatgtttaaaatgatatttatgatcaataacattttaggtctagat
ttcaacaggatgttaggaacatcagtgccagagatgtcctctccttacaagactttacat
gatagctatgttcccaaccgaagtagctcaaaacagcttgtgtctatagctgtggtagtg
ggatgtttgactgctttgggtgcactgctctccttttctatattggacaagtgcacagaa
gaagagcatttccaaaatgacaagctcttccaagaaacaagaactgatcaaaataacatt
tctgatgagcaaagccgaattatccttgtggagagcattcccctgtatatgaaatatgac
gacaatgcaacctttgggaccccagtggacaaggcctggagagatctcctgtccatggca
accaaccaagtcgatgtggcttccttctactggactcttaccggtgatgacatcaatatg
aactcttccactgacttacctggaaaggacatactggagcagcttggagctttgccttcc
agaaacgtatcagtgagggttgtgacgagtattccctctatgctgacaaactccacagat
ctacaggttctgagacagaaaggagtccaagtaagaaaggtgcactttgggcgtttgact
gggggtgtactccacagcaagttctggattgttgatcgtagacacatattcctaggaagt
gccaacatggattggagggctcttacacaggttaaggaactgggagtggtgatctacaac
tgctccagtctggctgaagacctccataagatctttgagtcctactgggtgatgggtcat
cacaacagctccatcccagacccttggccctccaaatatgacactgccatcaacaaagag
catcccttgctgctgaagactgataatgtttcaagcaaaatctacattacaggttctcct
ccctctttctgcccgacctctcggactcaggatctgaatgccatcctctcagtgatctca
ggggcgcagcacttcattgatgtggcagtcatggagtattttcccacaacacgcttcata
caccctcaaaggtactggccggccattgatgatgcattaaagagggctgcttttgagcgg
aatgttaaggtccgtctgctggtcagctgtggacgtgattctgatccagccatgctgcct
ttccttcagtctctagcctccctgaattaccctgcccagaacatcagcattcaagtgaaa
ctgtccattgtgccagtagggaaccagtcggagattccccactccagagtaaaccataat
aaatacatggtgactgataaagtagcatatattgggacgtctaactggtcagctgactac
ttcaacaccacagctggagtggggctggtggtttcccaacacacaccaaactggccctgg
gggacccaggctctgcaggggcagctcagagcagtgtttgacagggactggcactctcag
tttactgtatgttttgctgacttgggccatcaccttgactgtgcactctcaaaaggatag
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