Coregonus clupeaformis (lake whitefish): 121544394
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Entry
121544394 CDS
T08357
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121544394
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121544394
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
HTH_28
Motif
Other DBs
NCBI-GeneID:
121544394
NCBI-ProteinID:
XP_041710271
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Position
29:29954596..29959702
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AA seq
355 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIRDYKLGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQAPTQAGLSYNHIYPYSYPNAMSPNGKMGSGPGVPV
TAGHVSISRAWPSAHTVTNILGIRAFMDHQAIAGAEGYPQKMEDWSSVNRATFPSAHTVN
GIDKSAIDADIKYAQPSSTLSSYVPACAYSSSNQYSVYSGPGSYVTPGHHWQSQNSSLSL
PSSGMTMHAGDIHSSMAFKHPSREGDRKPTSPLSKQQQHEALSSVHGLNLPTSSS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggcgaggtgaatcagttgggtggtgtattcgttaatggacgaccc
ctgcccaacgccatacgactacggatagtggagttggcccagctcgggatcagaccctgc
gatatcagtaggcaacttcgcgtctcccacggctgtgtgagcaagatactagcacgatac
aatgaaacgggttccattttacccggtgccatcggggggagcaaaccacgcgttaccaca
ccgaatgtggtgaagaacataagggattacaaactaggtgacccggggatctttgcctgg
gagatccgggacaggcttctcgcagacggagtttgtgacaaatacaacgtgccctcagta
agctccatcagccggattttacggaacaagattggaaatctttcccagccgaaccagtat
gagagcagcaagcaagcccccacacaggccggcctctcttacaaccacatatacccctat
tcataccccaacgctatgtcacccaatggcaaaatgggcagcggtcccggagtacccgtg
acggccgggcatgtaagcatatcaagagcctggccgtcagcgcacactgtcaccaacatt
ctgggtatcagggccttcatggatcatcaagctattgctggagcagagggatatccacag
aaaatggaggactggagtagtgtcaacagagcgacgtttccctctgctcatacagtgaac
ggaattgacaaatcagccattgatgcggacataaaatatgcacagccttcatcaacatta
tccagttatgtgccagcgtgtgcctactcatcttcaaaccagtacagcgtttatagtggg
ccaggtagctatgtgacccctggacaccactggcagtcccagaactcgagtttgtccctc
ccaagcagcggcatgacgatgcacgcaggagacatccactcttcaatggcgttcaaacat
ccatcgcgagaaggagacagaaagcccaccagtccactaagcaagcagcagcagcacgag
gcgttgagcagtgtacacggactcaatctccctacctcgtcctcgtaa
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