Coregonus clupeaformis (lake whitefish): 121544415
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Entry
121544415 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 1B
KO
K04153
5-hydroxytryptamine receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121544415
04082 Neuroactive ligand signaling
121544415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121544415
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Biogenic amine
Serotonin
121544415
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Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
Motif
Other DBs
NCBI-GeneID:
121544415
NCBI-ProteinID:
XP_041710285
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Position
29
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AA seq
380 aa
AA seq
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MERSSQLEPTPALYGLMMNITNDTNVTESPDENEESLAYQTSLAVILFLVTLATTLSNAF
VIATIYQSKKLHTPANFLIASLAVTDLLVSILVMPICVLYTVSHTWTLGQVTCDIWLSSD
ITCCTASILHLCVIALDRYWAITDAIEYSKKRTPARAAGMIVTAWVIAISISLPPLFWRQ
VKAEELTECNVNTDHIFYTIYSTFGAFYIPTLLLIVLYGRIYVEARKIILKQSPKKVGKR
LTAAHLITNSPGSVASTSSLQCKRHDTHSSDTGSLASKNHVKVTLSDALLEKKRISAARE
RKATKTLGIILGAYIICWLPFFIYTLVVAACETCFYPELFDFFTWLGYLNSLINPIIYTM
SNGDFKEAFHKLLRFRFCIS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcaagtcaactcgagccaacacctgcattatatggactaatgatgaatatc
acaaacgataccaatgtgacagaatctccggatgaaaatgaagagagtttagcttatcaa
accagtttggcagtgattctcttccttgtcacacttgccactactttatccaacgcattt
gtcattgcaacgatttatcagtctaagaaactgcacactccagcaaactttctcatagcg
tctctagctgtcactgacctcttggtgtcaattttggtgatgccaatatgcgtcctgtac
acggtgagtcacacctggactttgggacaagttacatgtgacatttggttatcctcagat
ataacatgttgcactgcttctatccttcacttatgcgtaatcgctttggatcgatattgg
gcgataacagatgccattgagtactccaaaaagcgcacgccagcgcgcgcggcggggatg
atcgtgaccgcctgggtcatcgctatctccatctcccttcccccgcttttctggcgccag
gtgaaggcagaggagttaactgaatgtaacgtcaacacggaccacattttctacactatt
tactccacgtttggagcattctacatccctactttgctgcttattgtgctttatggaagg
atatacgtagaagcacgtaagataattttgaaacagtcacccaaaaaggtagggaaaaga
ctcactgcagcgcacctgatcaccaactcccctggatctgtggcatcgacatcatctttg
cagtgtaaaagacacgatacccactccagtgacacagggtccttggcaagtaagaaccac
gtgaaagtaaccctgtccgacgcacttttggagaaaaaaaggatctcagctgctagggag
agaaaagcgaccaaaacattaggaataatattaggcgcatacattatatgctggttgccc
tttttcatatacaccctagtggtcgccgcctgtgaaacttgtttttaccccgagttgttt
gactttttcacctggcttggttatctcaactcgttaatcaatccaattatatataccatg
tccaatggtgactttaaagaagctttccataaactcttgcgcttcagattttgcatatcc
tga
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