Coregonus clupeaformis (lake whitefish): 121544416
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Entry
121544416 CDS
T08357
Name
(RefSeq) cannabinoid receptor type 1A-like isoform X1
KO
K04277
cannabinoid receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121544416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121544416
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
Cannabinoid
121544416
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121544416
NCBI-ProteinID:
XP_041710286
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Position
29:45284837..45288867
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AA seq
489 aa
AA seq
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MKSGLWIDASYLCKECEAMKSALDGIADTTFRTITTGLQYLGSNDVSYSDPSIDSGFAKT
GFHLQKAHSAPLRNSFPGVPRDEELIFNGNSVYQTNFSELVVNGTFLDGGGSIQCGENFV
DMECFMILTPSQQLVVAVMALTLGTFTVLENLMVLCVILHSHTLRCRPSYHFIGSLAVAD
LLGSVIFVYSFLDFHVLHRKDSPNVFLFKLGGVIASFSASVGSLFLTAIDRYISIHRPMA
YKRIVTKTKAVIAFCMMWTISIVIAVLPLLGWNCKQLNSVCSDIFPLIDEKYLMFWIGMT
SVLLLFIIYAYMFILWKAHHHAVRMMSRSSQKSIIVYTADGTKVQTMRPEQARMDIRLAK
TLVLILVVLIICWGPVLAIMVYDLFWKMNNFIKTVFAFCSMLCLLNSTVNPIIYALRSKD
LRRAFHNICQTCRGTSQPLDNSAESDCHSRRSLKGTATAYKSTASCENTTVKVAKVTLLV
SAEISAEAV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctggcctatggatcgacgcaagttatttgtgcaaagaatgtgaagccatgaag
tctgctctggatggaatagctgacaccactttccgaacaataactactggtttgcaatat
cttggctccaacgatgtgagctacagtgacccgtccattgattctggctttgccaagact
ggattccatttacagaaggctcactctgccccacttagaaactccttccctggagtacct
agagacgaggagctcatctttaatggcaactccgtttaccagaccaacttctctgaactg
gttgtcaatgggacctttttggacggtgggggttctatccaatgcggggagaactttgtg
gacatggagtgcttcatgattctgacccccagccagcagttggtagtagcggtcatggca
ctcaccctgggaacctttacagtgcttgagaaccttatggtactgtgtgtgatcctccac
tcccacaccctgcgctgtcggccctcctaccacttcataggcagcctggctgtggccgac
cttctgggcagtgtcatatttgtgtacagtttcttggacttccatgtgttacaccggaag
gacagccctaatgtgtttctctttaagcttggtggagtcatcgcctctttcagtgcctct
gtgggcagtctctttctcacggccatagaccgctacatctccatccacagacccatggct
tacaagcggatcgtcaccaagaccaaggctgtcatcgccttctgcatgatgtggactatc
tccatcgtcatcgcggtgctccccctacttggctggaactgtaagcaactgaactcagtg
tgctctgacattttcccactcatcgacgagaagtacctgatgttctggatagggatgacc
agtgtgctgctgctgtttatcatctacgcctacatgttcatcctgtggaaggcccaccac
cacgccgtgcgcatgatgagccgcagctcccagaagagcatcatcgtctacacagcggac
ggcaccaaggtgcagacaatgcggcctgagcaggcccgcatggatatccgcctggccaag
accttggtgctgatcctggtggtcctcatcatctgctggggtcctgtgctggccatcatg
gtctacgacctcttctggaagatgaacaactttatcaagacggtctttgccttctgcagc
atgctttgcctgctcaactccaccgtcaaccccatcatctacgccctgaggagtaaggac
ctgcgccgggcctttcataacatctgccagacatgcaggggaacttctcaaccactggac
aacagcgctgagtccgattgccacagcaggaggagcttaaaaggcacagccacagcctac
aaatccacggctagctgtgaaaacaccactgtgaaagtggccaaagtcaccctgttggtc
tccgccgagatatctgcagaggcggtctga
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