Coregonus clupeaformis (lake whitefish): 121544424
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Entry
121544424 CDS
T08357
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121544424
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121544424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121544424
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
Platelet activating factor
121544424
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
CitMHS
DUF3382
Motif
Other DBs
NCBI-GeneID:
121544424
NCBI-ProteinID:
XP_041710295
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Position
29:complement(44389351..44391312)
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AA seq
369 aa
AA seq
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MGMTEDLAVTTTVNVSIVGNRTFLDSEFRYTLFPVFYGVVFILGLITNSYVLFVLWRLRD
TKPMNEICIYMANLTVADLLFVCALPFWIGYYHHGGVWLYGEFLCRVTGVFFFINTYCSV
LFLTAISVNRYWAVTRPLDAASSDHWCRGVAVTMVIWVVTLSMSVPYLLETGIQVDKDNM
LRCFEGYHHETDSEKRLVAATHLTIVGCFVLVFFLVVVCNLLIARALLAQSPTQARGSSS
SKPRGLKGRALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLDIKEGWGSIDWNKRTRQWLN
DAHQVTLMLMGLNCLLDPVVYCFATRRFHLYIKDHLKKVGRGKGCSETAITHMSMEECKN
VSQQHNREQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaccgaggacttagcagtgaccacgacagtgaacgtatcgatagtcgggaac
agaaccttcttggactcggagttccgctacaccctcttcccagtgttctacggtgttgtg
ttcatccttgggctgataaccaacagttacgtgttgttcgtgctgtggcgcctgcgcgac
accaagccaatgaacgagatctgcatctacatggccaacctgactgtggccgacctcctc
ttcgtgtgcgccctccccttctggatcggctactaccaccacggcggtgtctggctctac
ggcgaattcctgtgccgtgtcaccggcgtgttcttcttcatcaacacctactgctccgtc
ctcttcctcaccgccatcagcgtcaaccgctactgggccgtcacgcgcccgctggacgcc
gcctcgtccgaccattggtgccgtggggtggccgtcacaatggtcatctgggtggtcact
ctgtccatgtcggtgccgtatctcttggagacgggcatccaggttgacaaggacaacatg
ttgcgatgcttcgagggctaccaccacgagacggacagcgagaagcggcttgtggccgca
acccaccttaccattgtgggatgcttcgtcttggtcttcttcctcgtcgtagtgtgtaat
ctgctcatcgcccgggcgttactagcccagtcccctacccaggctcggggctccagttcc
tccaaacccagggggctgaaaggccgggccctgcagatgctgtgtgctgtggtgggggta
ttcgtggtgtgcttcctcccccaccacgtggtccagggaccctggaccctggctgtgctg
gacatcaaggagggatggggcagcatagactggaacaagaggaccaggcagtggttgaac
gacgcccaccaggtcaccctgatgctgatggggctcaactgcctcttggaccccgtagtg
tactgcttcgccaccaggaggttccacctgtacatcaaggaccatctgaaaaaggtgggg
aggggcaaaggctgctcggaaacagccatcacacacatgtctatggaggagtgcaagaat
gtgagccagcagcacaatagagaacagtag
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