Coregonus clupeaformis (lake whitefish): 121544526
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Entry
121544526 CDS
T08357
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121544526 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121544526 (capn3a)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
121544526 (capn3a)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C2: calpain family
121544526 (capn3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
121544526
NCBI-ProteinID:
XP_045065018
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All DBs
Position
29:complement(6565071..6626736)
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFATLKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSYSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSHHKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVITL
MQKNRRKERKLGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRIFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFRSIFLQIAGDEMEITANELKNVLNRVVSKHNDLNTEGFSVECCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFQHYNSDQAGSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtctggctttttctgcgaccggttgatccgggagagagagagaaga
gacggagaaggttccctcagcaagcccctacgcttcagcggacaggactttgccacgctg
aaacaggagtgcctcaccaagaagtgcctgtttgaggatgacaccttccctgcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgcgaaaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagaccttggtgactgctggctgctggctgctatagcctgtctgacc
ctgaatgagaagcttctctaccgtgtcgttcctcaggaacagagctactccgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgttgtcattgac
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtctgctgagaggaatgag
ttctggagcgccctgctggagaaggcctacgccaagctgcacggttcctatgaggccctg
aagggcggcaacaccacggaggccatggaagatttcaccgggggagtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttccagctcgcttcgagacccgtaccgtg
actggcctggtgaagggccacgcctactctgtgactgccgttgaggagtgtaagcagtcc
catcacaaggagtctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaacgggccctggagcgacaactctaaggagtgggtatctctgtctaagggagagaag
gacaagctccagcatcagagtgctgaggacggtgagttctggatgtcctttgaggacttc
aagaagaactacaccaagattgagatctgcaacctgacccctgacgccctggaggacgat
aagatccacaagtggacggtgtccgtgaacgagggtcgctgggtcagaggctgctctgct
gggggctgcaggaactacccagatacattctggaccaaccctcagtaccgcctgcgtctc
ctggaggaggacgatgacccagaggacaacgaggtggcgtgttccttcgtgatcactctg
atgcagaagaacagacggaaagagaggaagttgggagccaatctctttaccatcggattt
gccatctacgaggtgccgaaggagatgcacggcaacaagcagcacatgcagaaggacttc
ttcctgttcaactcgtccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggagagtacgtcatcatcccttccacctacgagcctcac
caggagggagagttcatcctcagaatcttctccgaaaagaggaacacctcagaggagatc
gagaacaggatcgaggctgatcatccagtgccagccccagccaatgcgggggaggagagt
gaggaggaccagcagttccggagcatctttctgcagatagccggggatgaaatggaaata
accgccaacgagctgaagaatgtgctcaacagggttgtctccaaacataatgacctgaac
acagagggttttagcgtggagtgctgcaggagcatgatcgcactcatggacatggacggg
actggcagactcaacctgcaggagttcagacatctctggaacaagatcaaacagtggcag
ggaatctttcaacactataactcggaccaggctggtagcatcaacagctacgagatgaga
aacgccgtcaacgatgcaggcttccgtctcaacaaccagctgtatgacatcatcaccatg
cgttacgccaacgagggcatgaacatcgactttgacagcttcatcagctgtctggtccgg
ctcgaagccatgttcagggcgttccaggcctttgaccaggatggggatggtacgatcaga
ctcagtgtcttggagtggctccagctgaccatgtatgcctag
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