Coregonus clupeaformis (lake whitefish): 121544532
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Entry
121544532 CDS
T08357
Symbol
numb
Name
(RefSeq) protein numb homolog isoform X1
KO
K06057
numb
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121544532 (numb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544532 (numb)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
121544532 (numb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
NumbF
PTB
PID_2
Motif
Other DBs
NCBI-GeneID:
121544532
NCBI-ProteinID:
XP_045065019
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All DBs
Position
29:6764995..6876365
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AA seq
686 aa
AA seq
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MNKLRQSFRRKKVVYVPESSRPHQWQTDEEAVRSGKCSFAVKYLGHVEVEESRGMHICED
AVKRLKTDSKFFKGFFTKAGKKAVRAVLWVSADGLRVVDDKTKDLILDQTIEKVSFCAPD
RNFERAFSYICRDGTTRRWICHCFMAIKDSGERLSHAVGCAFAACLERKQKREKECGVTA
TFDANRTTFTREGSFRVTTATEAAEREEVMRQLQDKKAESDVKSAMPLSSGPSVGVVNQA
VAPLPGSPSSSPPLGLQVIPRRHAPVEALARQSSFRGFPALNNNSSPFKRQLSLRMNDLP
STLQRKSDFPMKNTVQEMEGEGDSISSLCTQITSAFSGPPEDPFSQAPMPRPASSPQSPV
APPGAQPVNGTGPAFPAAAAANSPVLPPPLPARDTNPWAKTPGPHCQAGQHTSASSSAHP
GGDWTTTPVIVAPPTTTASPLHHSHRRTPSEADRWLEEVTKSICALQPASTPPFQPFLTP
NPPAPAFSTTPTQAFAVPSPAAQAFSTTQPPAQPFSAPMTVPSVAPVAFMSSLPPRQPAY
PMSNGLPYAHPSVPVVGITSSQMVANLIGSAPQPQPYPVPQYDPAQHTVGIPYKNPHQQP
SMPLPVPLQPPNGSVAFNGGGADSWAPPFLPPQSAPAPPLPSQLQPAADPFEAKWAALES
RSRQRTTPSPTNPFSSELHTTFEIQL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctacggcagagtttccggcggaagaaagtcgtgtacgttcctgagtctagc
cgaccacaccagtggcagacggatgaggaggcggtccgcagcggcaagtgcagcttcgca
gtcaagtacctgggtcatgtagaggtggaggagtccagaggaatgcacatctgtgaggat
gcagtgaagcgtctgaagacggacagtaaattcttcaaaggcttctttacaaaagcaggg
aagaaggcagtgagagcagtgctgtgggtctcggcagatggtctccgtgtagtagacgac
aaaactaaggacctgatcctagaccagaccatagagaaagtatcgttctgcgctccggac
aggaactttgagagagccttctcctacatctgtagagatggaactactagacgttggatc
tgccactgcttcatggctatcaaggactcgggtgagcgtctgagccatgcggtgggctgt
gccttcgctgcctgtctggagaggaaacagaagcgagagaaggagtgtggcgtcacggca
accttcgacgccaacagaaccaccttcaccagggagggctcgttccgagttaccacggca
acagaagctgcggagcgagaagaggtcatgaggcagttacaggacaagaaagcggagagc
gatgtcaagtctgcaatgcctctctcctcgggccccagtgtgggtgtggtgaaccaggct
gtggcccctctaccagggtccccctcctcctcccctcccctgggcctccaggttatcccc
cgcagacacgccccagtggaggccctggccagacagagttccttcagagggttccctgca
ctcaacaacaactcctctcccttcaaacggcagctgtccctcaggatgaacgatctgccc
tctaccctgcagaggaagtctgacttccccatgaagaacacggtccaggagatggaggga
gagggggacagcatcagctcgctgtgtacccagatcacctcagccttcagtgggcctcct
gaagaccccttctcccaggccccaatgccccgaccagcctcctccccacagtcacctgta
gcgccccctggggctcagccggtgaacggtaccggtcctgccttccccgccgctgctgct
gctaactctccagtactgccccctccactgcctgctcgagacactaacccctgggccaag
accccaggcccccactgccaagcagggcaacatacctcggcctcctcctccgcacaccca
ggaggtgattggacaacaacccctgtgattgtagctcctcccaccaccacggcatccccg
ttgcaccactcccaccggcgcacgccgtcagaggctgaccgctggcttgaggaggtcacc
aagtctatctgcgctctgcagcccgcgtccacaccccccttccaaccgttcctcaccccc
aaccccccagccccagccttctccaccaccccaacccaggctttcgctgtcccctcaccc
gctgcccaggcgttctcaaccacacaacccccagcccagcccttctctgcccccatgact
gtgccatcggttgcccctgtggccttcatgtcctccctgccccctcgccagcctgcctac
cccatgtccaacgggctgccctatgcccacccaagtgtgcccgtggtgggcataacctcc
tctcagatggtagccaatttgattggttcagccccccagccccagccgtaccccgtcccc
cagtatgatcctgctcagcacaccgtgggtatcccttacaagaacccccaccagcagccc
tctatgcccctccccgtccccctccagccgcccaatgggagtgtagccttcaacgggggc
ggagccgacagctgggcccctcccttcctgccccctcagtccgccccggcccctcccctg
ccctcacagctccagcctgcggccgaccccttcgaggccaagtgggccgccctggagagc
cggtcccgtcaacgcaccacgccgtcacccactaaccccttctcctccgagctgcacaca
acctttgagattcagctctag
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