KEGG   Coregonus clupeaformis (lake whitefish): 121544534
Entry
121544534         CDS       T08357                                 
Name
(RefSeq) presenilin-1-like isoform X1
  KO
K04505  presenilin 1 [EC:3.4.23.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310  Wnt signaling pathway
cclu04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121544534
   04330 Notch signaling pathway
    121544534
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cclu01002]
    121544534
Peptidases and inhibitors [BR:cclu01002]
 Aspartic peptidases
  Family A22: presenilin family
   121544534
SSDB
Motif
Pfam: Presenilin Oxidored_q3
Other DBs
NCBI-GeneID: 121544534
NCBI-ProteinID: XP_041710409
LinkDB
Position
29:6974940..7018727
AA seq 470 aa
MANNVEDVENNMATEASTQNQHTELRVRSRGGGGGAEQNGLPPSTAPPQRPPQVVESEED
EELPLNYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTIGQRA
LNSVLNATIMISVIIVMTMVLVLLYKYRCYKVIQGWLFLSSLLLLFFFSFIYLNEVFKTY
NVAMDWFTLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLI
LAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTGLGHRPLT
RKNSTEAPIAQPDSQAAPPSLALGPAPLSPPEDDGGFTPNWVGNQEYQLGPLQSTDETRR
EIQQRPSDRPPIMDDDDEERGVKLGLGDFIFYSMLVGKASAAANGDWNTTLACFVAILIG
LCLTLLLLAVFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggccaacaatgtggaggacgtcgagaacaatatggcgactgaggcgtcaacccagaac
cagcacacggagctgagggtacggtccagaggtggcgggggcggggcggagcagaatgga
ctgcccccctccacagcccccccacaacgccccccccaggtggtagagagcgaggaggat
gaggagttgccgttgaactacggggccaaacacgtcatcatgctgttcgtccccgtcacg
ctctgcatggtggtcgttgttgcaaccatcaagtccgtcagcttctacacccagaacgac
ggacagaggctgatctacaccccgttccctgaggacacagacacaataggacagcgagcc
ctgaactcagtcctcaacgccaccatcatgatcagtgtcatcatagtgatgaccatggtt
ctggtgctgctatataagtaccgctgctacaaggtgatccaaggctggctgttcctctct
tctctcctcctcctgttcttcttctccttcatctacctcaacgaagtgttcaagacgtac
aatgtggcgatggactggttcaccctggctgtgatcgtctggaacttcggggtggtaggg
atgatctgtatccactggaagggtcctctccgtctgcagcaggcctacctcatcatgatc
tctgctctcatggctctggtcttcatcaagtacctgcctgagtggaccgcctggctcatc
ctggctgttatatctgtctatgatctgttagcagtgctctgtcccaaaggtcctctacgt
atcctagtggagactgctcaggaaaggaacgaacccatcttccctgctctcatctactcc
tcgaccatggtgtggctggtcaacatggcagacactggcctcggacacagaccactgacc
aggaagaactcaacagaagcacccatcgcccagcctgatagtcaagcagcccccccgtct
ctggccctgggcccagcccccctcagcccccctgaggatgacggggggttcacccctaac
tgggtggggaatcaggagtatcagctgggacccctccagtccacggacgagacccgacgg
gagatccaacagcgcccctctgacagacctcccataatggacgatgatgacgaggagagg
ggagtgaagctgggtctaggagacttcatcttctacagcatgctggtggggaaggcctca
gctgcagcaaacggtgactggaataccactctggcttgctttgtagccatactcattggc
ctgtgtttgactcttcttctcctggccgtctttaagaaggccctccctgctctccccatc
tccatcttctttggcttggtgttctacttcgcgacagacaacctggtcagaccctttatg
gaccagctggctctgcaccagttctacatttag

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