Coregonus clupeaformis (lake whitefish): 121544534
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Entry
121544534 CDS
T08357
Name
(RefSeq) presenilin-1-like isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121544534
04330 Notch signaling pathway
121544534
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121544534
Peptidases and inhibitors [BR:
cclu01002
]
Aspartic peptidases
Family A22: presenilin family
121544534
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GFIT
Motif
Pfam:
Presenilin
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
121544534
NCBI-ProteinID:
XP_041710409
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Position
29:6974940..7018727
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AA seq
470 aa
AA seq
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MANNVEDVENNMATEASTQNQHTELRVRSRGGGGGAEQNGLPPSTAPPQRPPQVVESEED
EELPLNYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTIGQRA
LNSVLNATIMISVIIVMTMVLVLLYKYRCYKVIQGWLFLSSLLLLFFFSFIYLNEVFKTY
NVAMDWFTLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLI
LAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTGLGHRPLT
RKNSTEAPIAQPDSQAAPPSLALGPAPLSPPEDDGGFTPNWVGNQEYQLGPLQSTDETRR
EIQQRPSDRPPIMDDDDEERGVKLGLGDFIFYSMLVGKASAAANGDWNTTLACFVAILIG
LCLTLLLLAVFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatgtggaggacgtcgagaacaatatggcgactgaggcgtcaacccagaac
cagcacacggagctgagggtacggtccagaggtggcgggggcggggcggagcagaatgga
ctgcccccctccacagcccccccacaacgccccccccaggtggtagagagcgaggaggat
gaggagttgccgttgaactacggggccaaacacgtcatcatgctgttcgtccccgtcacg
ctctgcatggtggtcgttgttgcaaccatcaagtccgtcagcttctacacccagaacgac
ggacagaggctgatctacaccccgttccctgaggacacagacacaataggacagcgagcc
ctgaactcagtcctcaacgccaccatcatgatcagtgtcatcatagtgatgaccatggtt
ctggtgctgctatataagtaccgctgctacaaggtgatccaaggctggctgttcctctct
tctctcctcctcctgttcttcttctccttcatctacctcaacgaagtgttcaagacgtac
aatgtggcgatggactggttcaccctggctgtgatcgtctggaacttcggggtggtaggg
atgatctgtatccactggaagggtcctctccgtctgcagcaggcctacctcatcatgatc
tctgctctcatggctctggtcttcatcaagtacctgcctgagtggaccgcctggctcatc
ctggctgttatatctgtctatgatctgttagcagtgctctgtcccaaaggtcctctacgt
atcctagtggagactgctcaggaaaggaacgaacccatcttccctgctctcatctactcc
tcgaccatggtgtggctggtcaacatggcagacactggcctcggacacagaccactgacc
aggaagaactcaacagaagcacccatcgcccagcctgatagtcaagcagcccccccgtct
ctggccctgggcccagcccccctcagcccccctgaggatgacggggggttcacccctaac
tgggtggggaatcaggagtatcagctgggacccctccagtccacggacgagacccgacgg
gagatccaacagcgcccctctgacagacctcccataatggacgatgatgacgaggagagg
ggagtgaagctgggtctaggagacttcatcttctacagcatgctggtggggaaggcctca
gctgcagcaaacggtgactggaataccactctggcttgctttgtagccatactcattggc
ctgtgtttgactcttcttctcctggccgtctttaagaaggccctccctgctctccccatc
tccatcttctttggcttggtgttctacttcgcgacagacaacctggtcagaccctttatg
gaccagctggctctgcaccagttctacatttag
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