Coregonus clupeaformis (lake whitefish): 121544540
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Entry
121544540 CDS
T08357
Name
(RefSeq) T cell receptor beta chain MC.7.G5-like
KO
K10785
T-cell receptor beta chain V region
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121544540
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121544540
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121544540
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GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
Ig_2
C2-set_2
DltX
Marek_A
I-set
Motif
Other DBs
NCBI-GeneID:
121544540
NCBI-ProteinID:
XP_045065000
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All DBs
Position
29:1705429..1744537
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AA seq
304 aa
AA seq
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MMHPIVLLNWLFLLSPGQCGAAGPVVLQPRDLLPLPGNTTTSSEVTLKCSLGPGFSMSSY
TMMWYRQVRYGGPVEFLIKEYENTPGRHKVELVTSENMFILQISELVVEDSGVYFCAARG
YEAYFGNGTKLTVLDPAINGTVNGTVKVLPPSTEECEARNKKKKKTLVCVATDFYPDHVT
VFWQVNDHNRTEGAGTDNKALQNDNKLYSITSRLRVPANEWHNPANRFTCNVIFYDGKVD
KHGKDTISGDLQGQSGEGMTREYYVKSTLTAKLAYSVFIAKSTFYGLVVMVLIWKFKGSS
EKQI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatcccatagtcctcctgaattggctgtttctcctgtccccaggtcagtgtgga
gcagcaggccccgtagtgcttcagcccagagatctcctcccccttcctggtaacaccact
acctccagtgaagtcaccctaaagtgctccctgggtccaggcttcagcatgtccagctac
accatgatgtggtaccgacaggtccgctatggaggcccagtggagttcctcattaaggag
tacgagaacaccccgggccgacacaaagtggagctggtcacatcagagaacatgttcatc
ctgcagatctctgagctggttgtggaggacagcggtgtctacttctgcgctgctagaggt
tatgaggcctactttgggaatggaaccaaactcactgttttagacccagctatcaatggc
acagtgaatggcacagtgaaagtccttccaccctccactgaggagtgtgaggctagaaac
aagaagaagaagaagactctggtgtgtgtggccaccgacttctaccccgaccatgtcact
gtcttctggcaagtcaacgatcacaacagaactgaaggcgccgggaccgacaacaaggcc
ttgcagaatgacaataaattatacagtatcaccagcagattgagagtcccagccaacgaa
tggcacaaccctgccaacagattcacctgcaatgtcatcttttacgatgggaaggttgat
aaacatgggaaagacaccattagtggagatctccaaggtcaaagtggtgaagggatgact
agagagtactatgtgaagagcactctgactgccaaactggcctacagcgtcttcatcgct
aagagtaccttctatggactggtcgtcatggttctgatttggaagtttaagggctcctca
gagaaacagatttaa
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