Coregonus clupeaformis (lake whitefish): 121544541
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Entry
121544541 CDS
T08357
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121544541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121544541
Spliceosome [BR:
cclu03041
]
Complex A
U1 snRNP components
U1 related factors
121544541
Complex B
121544541
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
121544541
NCBI-ProteinID:
XP_041710415
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All DBs
Position
29:complement(1757612..1787517)
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AA seq
845 aa
AA seq
DB search
MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPTVLVPTTVSMVQK
PPAPRKELNPVSAKENQEGGSGGPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQG
ASGKLQGKNKTAFGFCEYKEPESTLRSLRLLHELVLGDKKLLVKVDAKTKAQLEEWKAKK
RSANGGAKSEDGPKDEEDEEEVLDEDTKRRDQIVKGAIEGLIREYGSELNAPSQDGDNHP
RKKKREKKEEEDINVMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRRE
RDKERERERERRDREREKEREKELERNDNNKERERDRERDRDRIDRDRDRDRTRERGERG
ERERVKERSREISKDRSRSRERSRDEKKHDREEDQEEAYERRKQQRKMRDKETAYQERLK
NWEIRERKKARDYDKENQREEEKRREMTKEGKRLKEFLEDYDDDRDDLKYYRGSALQKRL
RDREKETDLDERDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEEAERRRQPPVKPDPE
EEVQQEKPHREREHREREHRRDRRGGGADRPSPQHPQPQSDDDLEEGEELDDRDWEDSSD
ARPNPNLKPTLRPITSAPSVSSGSGGATPNSPGNESPCGIIIPHENSPEAPPTEEQRPKM
GLSLKLGAGASPNHQIHTGSKRKKLANADSVFNMFGEEEADEAPRKRKLVPLDYGEEDKT
LGLDGAEGPGGKGEEKRKHIRSLIEKIPTARPDLFNYPLDWTAVDSTLMERRIRPWINKK
IIEYIGEEEATLVDFVCSKVMSHGTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKK
IGLGK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggatttgccctccc
caattcgcggggttcccccagggagtcccagcaggtacacccatgattccagtccacatg
gggatcatgacctctgcacccactgtcctggttcctaccacagtgtctatggtccagaag
cctcctgctccgaggaaggagctgaacccagtcagcgccaaggagaaccaggagggcggc
agtggaggccccaccaccacagtgtttgtggggaacatctcagagaaggcttcagatatg
ctggtcagacagttgctggcgaaatgcggcctggtcctgagctggaaacgggtccaagga
gcctccgggaaactgcaaggtaaaaacaaaacagcgtttggtttctgtgagtacaaggag
ccggagtccaccctgcgttccctgcgtctgctacatgagctggtgctgggagacaagaag
ctgctggtgaaggtggatgctaagaccaaggcccagctggaggaatggaaggctaagaag
aggagcgccaacgggggagccaagtctgaggacgggcccaaggacgaggaggatgaggaa
gaggttcttgacgaggacacaaagcgtcgtgaccagatagtgaagggggccatcgagggg
ttgatccgggagtacggcagtgagctcaacgccccctctcaggacggagacaaccacccc
cgcaagaagaagagggagaagaaggaggaggaggacatcaatgtgatggagatggaggat
gacaaacgagacctgatatccagagagatcagtaaattcagagacactcacaagaaactg
gaggaggagaagggaaagaaagagcaggaacgccaggagatcgacaaggacaggagggag
agggacaaggagagggagagagagagggagcgccgggaccgcgagagggagaaggagaga
gagaaggagctggaaagaaacgacaacaacaaggagagagagcgggacagagagcgggac
agagaccggatcgatcgggaccgggaccgtgaccggacgagggagaggggagagagagga
gagagggagcgcgtgaaggagaggagtcgagaaatcagcaaagaccgcagtagatccaga
gaacggagccgcgatgaaaagaagcacgaccgtgaggaggaccaggaggaggcgtacgaa
cgcaggaaacagcagaggaagatgagggacaaggagactgcctaccaggaacgtctgaag
aactgggagatcagagagaggaagaaggctcgggactacgacaaagagaaccagcgtgag
gaggagaaacgccgtgagatgactaaagaaggcaagcgtctgaaagagttcctggaggac
tatgacgacgaccgcgacgatctgaaatactacaggggtagtgctttacagaagcgcctg
agagaccgtgagaaggagacagatctggatgagagagacaggaagagggagaaggaggag
catgatcagatcagacagagactgttagctgagggacacccagaccctgaggccgagctg
cagaggatggaggaggaggcagagcggaggaggcagcccccggtcaagccggacccagag
gaggaggtgcagcaggagaaaccacacagggagagggagcaccgagagagggagcaccgc
agggacaggagaggaggaggagcagacaggccttctccccagcaccctcagccccaatca
gacgacgacctggaggagggggaggagcttgatgatcgtgactgggaggactcgtcagat
gccaggccgaacccaaacctgaagcccacgctgcggccaatcacgtcggccccctcggtg
tcgtcgggcagcggcggcgccacgcccaactcccctggcaacgagtctccctgcggtatc
atcatccctcatgaaaactctcctgaagccccgcccaccgaggaacagcggcccaagatg
ggcctcagtctcaaactgggcgccggcgccagccccaaccaccagatccacactgggagt
aaacgtaagaaactcgccaacgccgacagcgtcttcaacatgtttggagaggaggaggcc
gacgaggctccccgtaaacgtaagctggttccgctggactacggtgaggaggataagacc
ctgggtctggacggggcggagggacccggagggaaaggagaggagaaaaggaaacacatc
aggagtctcatcgagaagatccctacggccagacctgatctgttcaactaccctctggac
tggaccgccgtggactcgactctgatggagcgtcgcatcaggccctggatcaacaagaag
atcatagagtacatcggagaggaggaagctacgctagtcgactttgtctgttctaaggtg
atgtctcacggcacaccgcaggggatcttggatgatgttgctatggttctggacgaggag
gcagaggtgttcatagttaaaatgtggaggctgttgatctacgaaacggaggccaagaag
attggtctggggaaatga
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