Coregonus clupeaformis (lake whitefish): 121544557
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Entry
121544557 CDS
T08357
Symbol
slc8a3
Name
(RefSeq) sodium/calcium exchanger 3 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121544557 (slc8a3)
04020 Calcium signaling pathway
121544557 (slc8a3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121544557 (slc8a3)
04261 Adrenergic signaling in cardiomyocytes
121544557 (slc8a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121544557 (slc8a3)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121544557 (slc8a3)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
121544557 (slc8a3)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121544557 (slc8a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121544557
NCBI-ProteinID:
XP_045065004
LinkDB
All DBs
Position
29:complement(2544530..2703441)
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AA seq
950 aa
AA seq
DB search
MDRFRPRLTRPGSGPGIRTGSSSSYQACLWFGLLSVAAAFLGAEGARTTPSPTTTTDSHN
ATCSEGTSRCKPGIVLPIWYPEDPSMGDKMARVIVYFVAMIYMFLGVSIIADRFMAAIEV
ITSQEKEIIIKRANGETTTATIRVWNETVSNLTLMALGSSTPEILLSVIEVCGHDFQAGE
LGPSTIVGSAAFNMFVIIGLCVSVIPEGETRKVKHLRVFFVTSAWSIFAYIWLYMILAVF
SPNVVQIWEGLLTLAFFPICVILAWVADRRLLFYKFMHKKYRADNLRGVIIETEHERSKG
IEMMDGGGKMVNSHFAHDGGAANNLISLIEGKEVDESRRDMIRILKDLKQKHPEKEMDQL
VEMANYYALSHQQKSRAFYRIQATRMMTGAGNILKKHVTEQTKRSASVQEVCVVGEEVEE
YVSQIAFEPAVYQCLENCGAALLAIARKGGDMANTIYVDYKTEDGSANAGADYEFTEGTV
VFKPGEIVKEISVGIIDDDIFEEDEHFFVRLSNVRVLESDEDETLLSPNSLPYPKALLGF
PSIATVTILDDDHAGIFTFESDTCQVSESVGVMEVKVLRTSGARGTVIVPYRTMEGIAKG
GGEDFEDTYGELEFRNDETCKTFHVKVIDDEEYEKNKNFFLELAEPRMVDMSLQKALLLA
EDVPKLSSEVEEAKRIAEMGKPVLGEHSKMEVIIEESYEFKNTVDKLIKKTNLALVVGTN
SWREQFMEAITVSAGDEDEEDSGEERLPSCFDYVMHFLTVFWKVLFACVPPTDYLNGWAC
FFISIIIIGMLTAVIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAVQDTYA
DASIGNVTGSNAVNVFLGIGVAWSIAAIYWHMQGKQFVVEAGSLAFSVTLYTIFAFLGVS
VLLYRRRAHIGGELGGPRGHRLATSAFFFSLWFLYILFSSMEAYCHIEGF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcaggccgaggctgacgaggccggggtcggggccggggatcaggacgggg
tcgtcctcctcctaccaagcctgcctctggtttggcctgctctccgtggccgcagccttc
ctgggcgcagagggcgcccgcaccacccccagccccaccaccaccacagactcccacaat
gccacctgctccgagggcacgtccaggtgcaagccagggatcgtcctgcccatctggtac
cctgaggatccctccatgggggataagatggcccgcgtcatcgtctacttcgtagctatg
atctacatgttcctgggagtgtccatcatagcggaccgcttcatggcggccatcgaggtc
atcacctcccaggagaaggagatcattatcaagagagccaacggagagaccaccaccgcc
accatcagagtctggaacgagacggtctccaacctcaccctcatggccctgggttctagt
acccctgagatcctgctgtctgtcatcgaggtctgcggacacgacttccaagccggggag
ctggggccgtctacgatcgtcggcagcgctgccttcaacatgttcgtgatcatcggcctg
tgtgtgtctgtgatcccagagggggagacgaggaaggtgaaacatctcagagtgttcttt
gtgacgtcggcgtggagtatcttcgcctacatctggctctacatgatcctggcggtgttc
agtcccaacgtggtccagatatgggaggggctgctcaccctggccttcttccccatctgt
gtcatcctggcctgggtagccgaccgacgactcctcttctacaagttcatgcacaagaag
taccgcgccgacaacctccgcggtgtgatcatcgagaccgagcacgagcgctccaagggc
atcgagatgatggacggcggtggcaagatggtcaactcgcacttcgcccacgacggaggc
gccgccaataacctcatcagcctgatcgagggaaaagaagtagacgagtctcggcgggat
atgatccggatcctgaaagacctgaagcagaaacacccagagaaggagatggaccagctg
gtagagatggctaactactacgccttgtctcaccagcagaagagtagagccttctaccgc
atccaggccacgcgcatgatgacgggcgccgggaacatcctgaagaagcacgtgacggag
cagaccaagaggagcgccagcgtgcaggaggtgtgtgtggtgggggaggaagtggaggag
tacgtgtcacagatcgccttcgaacccgccgtgtaccagtgcctggagaactgtggcgcc
gccctgctggccatcgccaggaagggcggcgacatggccaataccatttacgtggattac
aagacggaggacggctcggccaacgccggcgcagactacgagttcaccgagggcaccgtg
gtgttcaagcccggcgagattgtcaaggagatcagcgtcggaatcatcgacgacgacatc
tttgaggaggacgagcacttcttcgtgcgtctcagcaacgtgcgcgtcctggagtcagac
gaggacgagacgctactgtcccccaactctctcccgtaccccaaggccctgctggggttc
ccgtccatcgccacggttaccatcctggacgacgaccacgccgggatattcaccttcgag
agcgacacgtgtcaggtgagcgagagcgtgggcgtgatggaggtgaaggtgctgaggact
tcgggggcgagggggacggtcatcgtgccctatcgtacaatggaggggatcgccaaggga
ggaggggaggactttgaggacacctacggagaactggagttcaggaacgacgagacctgc
aagacatttcatgtgaaggtgatagacgatgaggagtatgagaaaaacaagaacttcttc
ctggagctggccgagcctcgcatggttgacatgagcctacagaaagcactgttactagct
gaagatgtccctaaattgtcgtcagaggtagaggaagctaagcggattgcagagatgggg
aagccagtcctgggggaacactccaaaatggaggtcatcatcgaggagtcctacgagttc
aagaacacggtggacaagctgatcaaaaagaccaacctggctctggtggtgggcaccaac
tcctggagggaacagttcatggaggccatcacagtcagtgcaggagacgaggatgaggag
gactctggtgaagagcgtctcccgtcctgtttcgactacgtcatgcacttcctcaccgtc
ttctggaaggtcctgttcgcctgtgttcctcccacggactacctgaacggctgggcctgc
ttcttcatctccatcatcatcatcggcatgctgaccgccgtaataggagatctggcctct
cactttggctgcaccatcggcctgaaggactctgtcaccgccgtggtgttcgtagcgttg
ggtacatctgtccctgacacgtttgccagtaaggtagcggcggtgcaggacacgtatgca
gacgcctccatcggtaacgtgacgggcagcaacgcggtcaacgtgttcctgggcatcggg
gtggcgtggtcgatagccgccatctactggcacatgcagggcaagcagtttgtggtggag
gctggctccctggccttctccgtcaccctctacaccatcttcgccttcctgggggtctcc
gtgctgctgtaccgccgacgggcccacatcgggggggagctgggcgggccgcgcggccat
agactggccacctcagccttcttcttcagtctctggttcctctacatcctcttctccagc
atggaggcctactgtcatatagagggcttctag
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