Coregonus clupeaformis (lake whitefish): 121544614
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Entry
121544614 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: centromere protein F
KO
K11499
centromere protein F
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544614
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
121544614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_N
CENP-F_leu_zip
CENP-F_C_Rb_bdg
TPR_MLP1_2
FAZ1_C
Fez1
Motif
Other DBs
NCBI-GeneID:
121544614
NCBI-ProteinID:
XP_041710528
LinkDB
All DBs
Position
29:complement(8013724..8030819)
Genome browser
AA seq
2943 aa
AA seq
DB search
MSWAVEEWKDGLSGKALQKIQEIEGQLDKLKKERTQKQFQLDALEAALQKQKQKVDSEKT
EASAIKRENQALVESCDALEKARQKATHDLGVKVQQVSNLEGQLGTSKKTIERLEQELKK
YKNEKDRSQPSHSSDVQSYSTPQKTLATPAATPSFRQHDSRLEDLQERHNQEVEERKRLE
AELKITQVKLLNQLSVSHKDIAARQQAGSSIFPWQQQDKGRQSQDTIETPLTRRAVGGTS
TGGFLWNTEDTPIKPIQRISTSVSQFDSDGSSSQQMEQLRTLNQELKSKVSELEQRLQSQ
EKDTRLQSGRLQELQGQLDQARRDLTDRDKTLGKSRDELSKATTQHEQAVAKCVSVEQKL
KQVSEEMSCQRHNAESCRRALEQKVKDQEKESQKELAHLQNSHHALEQQFNQTKTKLNQE
IQQAKKDHNILQAEMDKVSCQRSQLERDQEEQKQKLLRSEQSLQASQNKEQDLRKKFEEM
QREKNVVSAQLDQGSKRLSQLEEERKTSEQNLKRTQSMLDDFRGKNEAQCDELKGLVTKL
ESQTRSSAQDLENLKKTLADAETKNDKTQSELKTQKQEVEQITNKHNALEKEIQELKTTL
TTTQSECVQLKKECETLQGWKTEKETLVNETEAVQQGFADKITELEKSLGSLNDDNSGLM
EQLKTLDAEKACLSGQIDSLKGELLIKCTDLEEKGHMYEELQKQLEESDQKHSKDLENVG
LQVTQLEGQVKDLESRLQVETGRAERAERSHTVLQEQYQAACDLARSKDALVELGQSEVA
QLRESLAQITALQEEQLARFTQEKSTLLKECEESVAAKADEAEQAKLSLVKIQQELPFLQ
DQVASLESNLKIQKSLGVALQAKYDNLVNTKEDLVEKLSEAEKRGESLQGEVNSLSEQAK
TVGSLQERCDNLTAAAQETISALQNMTETLTQTETELQTLRDMVEKLEAQLSEAEKKASN
LERDKAEMVEKIQREAEEVSVKYQSLQDSQEEERNGLLKKISTLKHRLAENDAASTQLSS
DLKNSLEALQKTHSAAVELNSNLESSLVEKTNLISSQEKEVKELSERLRKETESHVTEME
TYLQKQRGLKEQLDIVKSQLESKSQEAAEAKEKWERASLELSKLREDLSSARNSVDEKGR
KIKSLKERLNQAESEQDKATEALKEKVISMNKIKVQLEMLQMDLEDNEACMNSFDTQIEE
LKGTVEELRGTVASLDGRLEESATQRSTLETELGSVKEQLSEKSCEVTQLTASLEDARQQ
AGLVESLQATVDGLMETLEEVVRKHSHLEMDIIQLTEEKEQLTVEKEYMTVEKEQLTVEK
EYMTVEKEQLTVEKENLTVEKEQLTVEKVQLTVEKEQLTVEKEQLTVEKEQLTVEKEQLT
VEKEQLTVEKVQLTVEKEQLTVEKEQLTVEKEYMTVEKEQLTVEKEQLTVEKEQLTVEKE
QLTVEKEQLTVEKEQLTVEKEQLTVEKEKLTVEKEYMTVEKEQLTVEKEQLTVEKVQLTV
EKEQLTVEKEQLTVEKEKLTVEKEQLTVEKEQLTVEKEQLTVENEQLTVEKVQLTVEKEQ
LTVEKEQLTVEKEQLTVEKEKLTVVKEQLTVVKEQLTVEKRQLEADLQRHGLNAGDERDA
VKQENECLQRTLQSLTENYEAVQAAFERATRQSEDQARERLGKFEREQTELHQRLSGLQG
ELALFKEQYDSLMTQASQQQSLIEQLQTKRDQKVCTGAVDGPTSRQTSGSFVNVSLPLKD
DTEEMKPTAAEQSDDLHNSEVPLQPGRDLNDEPAEESSDCMDEVPVEQQKALRESLDNDD
MTVRGEHPAVSRTPPDQDQLDQSREAVRKLEEELQTLHSQLDLATSEMTLRKELCSELEV
KVEGLEVKVQQMEEERCGAAEKISAALVERRTLGDQISELTEEAESLRLELQTSKCQLSD
VMEMLETLEMAKGGWGERFFQVESELKRVCSEKANLEKHILSMESDLECLTEQKVKLEGE
REASRRAKANLEQQLATLTSESGQLRQELVSCAEDRDELEQSVSQWRDKAESLEKTNVDT
REVIKILEEDIRNGKRESNVASANLESLQKERGQLVLQCQTLEKTITLQSGEKEDLINQL
NSFKDNQSSASRDTESMASKIQSLEGEISRLVQSLESSLLEKGEIASRLNSTQEEVAQMR
SGIERLQVRIESDERKKKHISELLKAAQRKADALQDQIDKHEREREEADQNLEEAVLQAE
TAMAQLEEFEEEKKELAKKIEEMTAELDSLRNEKERLEGALSLKNAEIEEMTTELDSLRN
EKERLEGALSLKNAEIEEMKAANRAATEELEIGMREAEEKQRAVVEGLQAQLGSVSSELQ
TRREDLEGEKERMVSLAAEWEKERERLQHLVGEWKTEGERLKKEVERLQALEVEWEKERE
MLTLRMQEDVEAQQREMEDFRENHNTLQQEIEKLQALLSECEQKEQAQSAERLELQQQAE
SYKLSLEEVTSEKEVLKAQQEEEVAALRGELTSEKEVLRGQLAAAEEKIRGQLSELSSLR
TRMEELRTSITEQDSSKQVSELSSRVVHLSKQRDSALSKMSLWMNSCKQLEKEREALVLE
TQQLQASQTPVPAGEGSSEEVQTELKELKKALEERSEEVQELSKTLEEKSRELEVQKRSS
EAELEELTESLEERSREADESMDKYCSLMVRVHKLEETNDMLKTRLERLVTQTANNTASN
TANNASNTANNASNTANNASNTANNASNKTPRRKSGRRSAARAQEALIPSALVEADSENT
VPAGQGSLGKRGCGALAASDNSNTPFKAQEALLNTAKRVKATATTSKPGSRQEEEEFRPE
GLPELVQRGFADIPLGEASPYIIRRTAVQRCSPRLAAARHTATTPSAAPQHKVLEPMALQ
SPAGMATLSDSPVGKGLCVSPASSGEERRGRRSLSTRKTPEQREKRKEAMMTSSRQEENC
QVQ
NT seq
8832 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggcagtggaggagtggaaggatggtctttcaggcaaagccctgcagaagata
caagagattgagggacagctggacaagctgaagaaggagaggactcagaaacagttccag
ctcgacgcactggaggctgctctacaaaaacagaaacaaaaggttgacagtgagaagacc
gaggcgtcggctattaagagggagaaccaggccttagtagagtcatgtgacgccctggag
aaggcccgtcagaaggcgacccatgacctgggggtcaaagtgcaacaggtcagcaacctg
gagggtcagctcggcaccagcaagaagaccatagaacgactggagcaggaactcaagaaa
tataagaatgaaaaggaccgttctcagccctcccactcctctgatgtacagtcctacagc
actcctcagaagaccttggccactcctgctgctacccccagcttcagacagcatgactcc
aggctggaggaccttcaggagagacacaaccaggaggtggaagagaggaagagactggaa
gccgaactcaaaatcacacaggtcaaactgttgaaccagttgtccgtcagtcataaggac
attgccgcccggcaacaagcaggctcctccatattcccatggcaacagcaggacaagggc
cgccagtcccaggacaccattgaaacgcccctgacgagacgagcagtgggcgggacatcc
actggcggcttcctgtggaacacagaggatacaccaatcaaacccatccagcgaatcagc
acatctgtatcccagtttgactctgatggctcctcctcccagcagatggaacagctgagg
acactgaatcaagagctgaagagtaaagtgtctgagctggagcagcgtctgcagtcacag
gagaaggacacgaggctgcagagcggcaggctccaagagctacaaggccagctggaccag
gctaggagagacctgacagacagagacaagaccctgggcaagagcagggatgaacttagc
aaggctaccactcagcacgaacaagctgtcgccaagtgtgtgtcagtggagcagaaattg
aagcaggtctctgaggagatgtcctgccagaggcacaatgctgagagctgcagacgagct
ctggaacagaaggtcaaggaccaggagaaggagagccagaaggagctggcccacctccag
aacagccaccacgccctagagcagcagtttaaccagaccaagaccaagctgaaccaggag
atacagcaagccaagaaagaccacaacatcctgcaggctgagatggacaaggtgtcatgc
cagaggagccagctggagagagaccaggaggagcagaaacagaagctgctgaggtcggaa
cagagcctacaggccagccaaaacaaggagcaggacctcaggaagaaatttgaggagatg
cagagagagaagaacgttgtgagcgcccagctggaccagggcagcaagaggctgtctcag
ctggaggaggagaggaagacctctgagcagaacctcaaacgcacccagagcatgctggat
gacttcagaggcaaaaatgaagcccagtgcgacgagctgaaaggacttgttactaaactg
gaaagccagaccaggtcgtcagcccaagatctagagaacctaaagaaaacgctcgccgac
gcagagaccaagaatgacaagactcagagtgaactgaagacacaaaaacaggaagtggaa
cagatcacaaacaaacacaacgctctggagaaggagatccaggagctgaagacaaccctg
accaccacacagagtgagtgtgtgcagctgaagaaggagtgcgagacacttcagggatgg
aaaacagagaaggagacactcgttaatgagactgaggctgtgcagcaaggctttgctgac
aaaatcactgagctggagaagagtctgggctcgttgaacgacgataacagtggtctaatg
gagcagctgaagactctggatgctgagaaggcttgtctatcggggcagatcgactccctg
aagggagaactcctcatcaagtgcaccgacctggaggagaagggccacatgtacgaagag
ctccagaaacagctggaggagtctgaccagaaacactccaaagacctggaaaacgttggg
ttacaggtgacccagctggagggacaggtgaaggacctggagtccaggctgcaggtggag
actggcagggcggagcgggccgaaaggtctcacactgtgctccaggagcagtaccaggcg
gcctgcgacctggcccggtctaaagatgctcttgtggagttgggccagagcgaagtagcc
cagctccgggagagcctggctcagatcacggccctgcaggaggaacagctggccaggttt
acccaggagaagagcaccctcctgaaggagtgtgaggaaagcgtagcggcaaaggcagac
gaggctgagcaggccaagctgagcctggttaagattcagcaggagctgccattcctccag
gaccaggtggcttcgctggagtccaacctgaagatccagaaaagtttgggtgttgcgcta
caggccaagtatgacaaccttgtcaatactaaagaggatcttgtggagaagctttccgag
gcagaaaagcgaggggaaagtcttcagggtgaagtcaatagcctctcagagcaggcgaag
actgtcggctctctacaggagcgctgtgataatctgacagctgcggcacaggagaccata
agcgctctgcagaacatgaccgagaccctgacccagactgagacagagctgcagacactg
agagacatggttgagaaactggaagctcagctgagcgaagctgagaaaaaggcctcaaat
cttgagagggacaaggcagagatggtagagaagatccaaagggaagctgaagaggtttct
gtgaagtatcaaagccttcaggactcccaggaagaggagaggaatggtttgctgaagaag
atctctacattgaagcacagactcgctgagaatgacgctgcttccacccagctgtcttct
gatctgaagaactccctagaagcgctgcagaagacccactctgctgccgtggagctcaac
tccaacttggagagcagcctggtggagaaaacaaacctaatctcctctcaggagaaggaa
gtcaaagagctctcagagagactccgtaaggaaaccgagagccatgttacagagatggag
acttacctccagaaacagagaggcctgaaggagcagcttgatattgtaaagagccagctg
gagagtaaaagccaggaggcagccgaggctaaggagaagtgggagagggcctcactagaa
ctgtctaagctgagagaagatttgtcttctgccagaaacagtgtcgatgagaaaggccgt
aagatcaagagtctgaaagagaggttgaaccaggctgagtctgaacaagacaaagctacc
gaggccctgaaagagaaggtcatcagcatgaacaagatcaaggtccagctggagatgctt
cagatggacctggaggacaatgaggcctgcatgaactcctttgacacccagatagaggag
ctcaaaggaaccgtggaggaactccgaggaaccgtggcctctctggacgggagactggag
gagagcgcgacgcagaggtccaccttggagaccgagctgggctctgtcaaagagcagctg
tcagagaagagctgtgaagtcacccagctgacagcaagtctcgaagacgctcgccagcag
gcaggtttagtggaatcactccaggccactgtcgatgggctgatggagactctggaggag
gtggttagaaaacacagccatctggagatggacatcattcagctcactgaggagaaggag
cagttgactgtggagaaggagtatatgactgtggagaaggagcagttgactgtggagaag
gagtatatgactgtggagaaggagcagttgactgtggagaaggagaatttgactgtggag
aaggagcagttgactgtggagaaggtgcagttgactgtggagaaggagcagttgactgtg
gagaaggagcagttgactgtggagaaggagcagttgactgtggagaaggagcagttgact
gtagagaaggagcagttgactgtggagaaggtgcagttgactgtggagaaggagcagttg
actgtggagaaggagcagttgactgtggagaaggagtatatgactgtggagaaggagcag
ttgactgtggagaaggagcagttgactgtggagaaggagcagttgactgtggagaaggag
cagttgactgtggagaaggagcagttgactgtggagaaggagcagttgactgtggagaag
gagcagttgactgtggagaaggagaagttgactgtggagaaggagtatatgactgtggag
aaggagcagttgactgtggagaaggagcagttgactgtggagaaggtgcagttgactgtg
gagaaagagcagttgactgtggagaaggagcagttgacagtggagaaggagaagttgact
gtggagaaggagcagttgactgtggagaaggagcagttgactgtggagaaggagcagttg
actgtggagaatgagcagttgactgtggagaaggtgcagttgactgtggagaaggagcag
ttgactgtggagaaggagcagttgactgtggagaaggagcagttgactgtggagaaggag
aagttgactgtggtgaaggagcagttgactgtggtgaaggagcagttgactgtggagaag
aggcaactcgaggctgacttgcagaggcacggtctgaatgctggagacgagagggacgcg
gtcaaacaggagaacgagtgtctccagcgtacgctacagagcctgacggagaactacgag
gctgttcaggctgcgtttgagagagcgacccggcagagcgaggaccaggccagagagagg
cttggaaagtttgagagggaacaaacagagctccaccagagactgagcggactgcagggt
gaactggccctgttcaaggagcagtatgacagcctgatgacacaggcaagtcagcagcag
tccctcatagagcagcttcagaccaagagagaccagaaggtctgtacaggagcggtggac
ggaccgacttccagacagacgtcaggctccttcgtcaacgtcagcttacccctaaaagac
gatactgaggagatgaaacccacagcggctgagcaatcagatgacctccacaactctgag
gtacctctacagccagggagggacctcaacgatgagccagctgaggagtccagtgactgc
atggatgaagtccctgtagagcagcagaaagcactccgtgaaagcctagataatgatgat
atgaccgtcaggggtgaacatccagcagtctccagaactccccctgaccaggaccagctg
gaccagagcagggaggcggtcagaaagctagaggaggagctacagactctccactcccag
cttgacctcgctacctctgagatgaccctcaggaaggagctgtgctccgagctggaggtc
aaagttgaagggttagaggtgaaggtccaacagatggaggaggagaggtgtggtgccgcg
gagaagattagcgctgccctagtggagagacggacgctaggtgaccagatctcagagctg
acagaggaggcagagtccctgagactggagctgcagacctccaaatgtcagctctctgat
gtcatggagatgctggagacactggagatggccaaaggtggttggggcgagaggttcttc
caggtagagagcgagctgaagagggtttgttctgagaaggccaatctggagaaacacatc
ctctcaatggagtctgatctggagtgcctgacagagcagaaagtcaagctggagggagag
agagaggctagccgcagggctaaagcaaacctggaacagcagctggccaccctcacctca
gagagcggacaactcagacaggagctagtgtcctgcgctgaggatagagacgagctggaa
cagtcagtgtcacagtggagggataaggcagagagtctggagaagacaaacgtggatact
agagaggttattaagatcttagaggaagatatcagaaacgggaagagagaatctaatgtg
gcgtctgctaacctggagagtctgcagaaggagagaggtcagctggtgctgcagtgtcag
acactagagaagaccatcactctgcagagcggggagaaggaagacctgattaaccaactg
aacagctttaaagataaccagagctctgcgagcagagacactgagtccatggcctctaag
atccagtctctggaaggggagatctctagactagtccagtctctggagtcttctctgcta
gagaaaggagagatagcctcacgcctcaactctacccaggaggaggtggcccagatgagg
tcgggcatcgagaggctccaggtccgcatagagtcagacgagaggaagaagaaacacata
agtgaactgctgaaggctgcccagaggaaagctgatgctcttcaggaccagatagacaaa
catgagagagagagggaagaggctgaccaaaacctagaggaggctgtgcttcaggctgag
acggccatggcccaactagaagagtttgaggaagagaagaaggaactggccaagaagatt
gaggagatgaccgccgaactggacagcctgagaaatgagaaggagaggcttgagggagcg
ctctccctgaagaacgcagagattgaggagatgaccaccgaactggacagcctgagaaat
gagaaggagaggcttgagggagcgctctccctgaagaacgcagagattgaggagatgaag
gcagcaaaccgagctgccactgaggagctggagattgggatgagagaggctgaggagaaa
cagagggcagtggtggaggggttacaggcccagcttggctctgtgagctctgagctgcag
acacgcagagaagacctggagggggagaaggagagaatggtgtctctagcggcggagtgg
gagaaggagcgggagaggctgcagcacttagtaggggaatggaagactgagggggagagg
ctgaagaaagaggtggagcgactgcaggctttggaggtcgagtgggagaaggagagagag
atgctgactctgagaatgcaggaggatgtggaggcacagcagagagagatggaggacttc
agagagaaccacaacaccctgcagcaagagatcgagaagctgcaggcgctactgtctgag
tgtgagcagaaagaacaggctcagtctgcagagagactagaactacagcagcaggcagaa
agctacaagttatccctggaggaggttacctccgagaaggaggtgctgaaggcacagcag
gaggaggaggtggcagcccttaggggtgagctgacctcggagaaggaggtgctgagggga
cagttggctgcagcggaggagaagatcagaggtcagctgtcagagctgagcagcctgaga
accagaatggaggagctcagaacttccatcacggagcaggacagcagcaaacaggtatct
gagttgagctccagagtggtccatctgtctaagcagagggactcagccctcagtaagatg
agcctgtggatgaactcctgtaaacagctggagaaggagagggaggctcttgtactggag
acccagcaactacaggccagccagacaccagttccagctggtgaagggagcagtgaggag
gtgcagactgaactcaaagagttgaagaaagctctagaggagaggagtgaggaggtgcag
gagctcagcaagactctagaagagaagagcagggagttggaggttcagaagaggagcagt
gaggctgaattggaggagctcactgaatcgttggaggagaggagcagggaggcggacgag
agcatggataaatactgcagcctgatggtccgtgtccacaagctggaggagaccaacgac
atgctcaaaacacgcctggagcgccttgtcacgcagaccgctaacaacacggctagcaac
acagctaacaacgctagcaacacggctaacaacgctagcaacacggctaacaacgctagc
aacacggctaacaacgctagcaacaaaacacccaggagaaagtcaggcaggaggtcagcc
gccagggcacaggaagcactcatcccgtcggctctcgtggaggcagactctgagaacacg
gtgcctgctggtcaggggtctttggggaagaggggttgtggtgcgctagcagctagcgac
aacagcaacactccatttaaagcccaagaggccctgctgaacactgccaagagggtcaaa
gcaacggcaaccacgtccaaaccaggaagtagacaggaagaggaggagtttaggccagag
ggacttcctgagctggtgcagagagggtttgctgatatccctctaggagaggccagtccc
tatatcataaggagaaccgcagtgcagcgctgtagccctcgtctggccgccgcacggcac
actgccaccaccccctctgcagccccccaacacaaggtgctggagcccatggccctccag
agccctgctggcatggcaactctgtctgacagccctgttgggaaaggcctgtgtgttagt
cccgcctccagcggcgaggagaggcgtggccgtcggtccctgagcacacggaagactccg
gaacagagggagaaacgcaaagaggccatgatgacatcctcacgccaagaggagaactgc
caagtgcagtaa
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integrated database retrieval system
