Coregonus clupeaformis (lake whitefish): 121544635
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Entry
121544635 CDS
T08357
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121544635
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121544635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
121544635
NCBI-ProteinID:
XP_045065037
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All DBs
Position
29:9109727..9117556
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AA seq
778 aa
AA seq
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MEELHAHCLNCVNRRCMIRPETGMSCDLIRCPLVCGAVFHSCKVEEHHLLCLFERVPCLN
TGFGCPFTIPRIKMAEHLETCPASVVCCTMEWNRWPVSYSDRKSYEHLSDVEVVEQLDMA
LALQDQRMLLESLRVTTNTSEKEYNKPAEETRDKMADVVSGVPETARSNGTVEMDEAAAL
TNGVVEMDDDYASYSEVHKINLAATLAVLRSAKDIDLINVNVEKSGERNGVLHRGEDSDG
DDDDDDLKNVEVKTSDTESGCELGAVGGVAVDRQGDDESYWIESSEEVEKDHVMGLAEVG
GPPPLSNGFNHTGDDQNHLGQREWMVLSRSPPRRSEVNRFSDFRPVMPYLSMPNIEPSGP
HPPPLPIHLPLPMPLPNLEPYNVLQHLPLEIEDSWLERKLQNLQVLRGMSVFTFNGRRAL
MSDPCLFRAKTEDRSVDTSDLEVTDDPLGLHGIDLITAALLFCLGDSPGGRSISDSRFVD
GYRIDFGTQTFSFPSAILATNTMVGDIASASACDHASPQLSNPSPFHSLRLDLVLECVAR
YQTKRRTMFTFVCGQLFRRDEFSSHFKNVHGDIHAGLNGWLEHRCPLAYYGCTYSQRRLC
PSVQGSRIIHDRHLGSFGVQPDMPPQYGDKTLPRNACRFGSTCDHLSSLPFEVLQYVASF
LDGFSLCQLSRVSRTMRDVCASLLQSRGMVVLLWENTRRPDGSSSWQIRNKVWRFSTAFG
TVNEWKFANIANMADHLKKCKFNSITCRDEAIPLPCMCLSRELTKEGRSLRSVLKPVL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctccatgcccactgcctgaactgtgtgaacaggaggtgtatgatccgccca
gagaccggtatgtcctgtgatctaattcgctgccctctcgtctgtggagcagtctttcac
tcctgtaaagtggaggagcatcatttactatgcctgtttgaaagagtgccttgcctcaac
actggattcgggtgccctttcactatcccccggattaagatggctgaacacctagagacg
tgcccggccagtgtggtgtgttgcaccatggagtggaaccgttggcctgtgagctattca
gacaggaagtcctatgagcacctgagcgatgttgaagtggtggagcagctagacatggcc
ctggctctgcaagatcagaggatgctactggagtccctccgagtcaccaccaacacgtca
gagaaggaatataataaaccagctgaggaaacgcgcgacaagatggctgatgtagtgtca
ggtgttccagagactgccagaagtaatggaacggttgaaatggatgaggctgctgctttg
actaatggagtggttgaaatggatgatgattatgcgtcttatagtgaggtgcacaaaata
aacttagcagctaccttggccgttctcagaagtgcaaaggacattgacttgatcaatgta
aatgtggaaaagagcggtgagagaaatggggttctccataggggagaggacagtgatggt
gatgatgatgatgatgatttgaagaatgtagaggtgaagacaagtgacacagagtcgggc
tgtgagctcggagcagtgggcggagtcgcagtggacagacagggagatgatgagagctac
tggatagagtcttcagaggaagtggagaaggaccacgtgatgggtcttgcagaggtgggt
ggtcctcctcctctcagtaacggtttcaaccatacaggagacgaccaaaatcacttggga
cagcgtgagtggatggttctaagcagatctccgcccagacgctctgaagtcaacaggttt
tcagacttcaggccggtgatgccttatctctccatgcctaatatagaaccctctgggccc
caccctcccccactacccatccacctgcctcttcccatgccactccctaatctggaaccc
tacaacgtgctccagcatctgccattggagatagaagacagctggctggagaggaaactt
cagaacctccaggtgctcagagggatgagtgtgtttacgtttaacgggcgcagggctctg
atgtctgacccctgtctgttcagagccaaaacagaggacaggtcagtggacacctcagac
ctggaggtaactgacgatccattggggctccatggaatcgacctgatcactgcagcgctg
ctcttctgtctgggggactcccctgggggccgcagcatctcagacagcaggtttgtagac
ggttaccgcatcgactttggtacccagaccttctccttcccctcggctatactggccact
aacaccatggtgggggacatcgcctcagcgtcggcctgtgatcacgctagccctcagctc
tccaaccccagccccttccactccctcagactggacctggttctggagtgcgttgcccgt
taccaaaccaagcggcgcaccatgttcacctttgtgtgtggacagctgttccgcagggac
gagttctcctcgcatttcaaaaacgttcacggggacatccacgccgggctgaacggctgg
ctggagcaccgctgtcccctggcctactacggctgcacctactcccagagacgcctctgt
ccctctgtgcagggctccaggatcatccatgacagacacctgggttcgtttggggtgcag
cccgacatgcctccccagtacggagataaaaccctccccaggaatgcctgtcggttcggg
tccacctgcgaccacctgagctccctgcccttcgaggtgctccagtatgtggccagtttc
ctagatggcttcagcctgtgccagttgtccagggtctctcggaccatgagggatgtgtgt
gccagcttactacagtccagaggcatggtggtgctgctctgggagaacacacgaaggcct
gatgggtcgtcctcatggcagatccgaaacaaggtgtggcgattcagcacggccttcggt
acggtaaacgagtggaagtttgccaacatcgccaatatggccgaccatctgaagaagtgc
aagtttaacagcatcacctgtcgggacgaggctatccctctgccttgcatgtgcttatcc
agagagctcaccaaagagggacgctcactgcgctcagtcctcaagccagtattatga
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