KEGG   Coregonus clupeaformis (lake whitefish): 121544637
Entry
121544637         CDS       T08357                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121544637
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    121544637
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    121544637
SSDB
Motif
Pfam: LLGL WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_HPS5 ANAPC4_WD40 WD40_Prp19 Beta-prop_IFT140_1st WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Lgl_C EIF3I Beta-prop_EML PEP5_VPS11_N WD40_like KNTC1_N Synaptobrevin RAB3GAP2_N WDR54
Other DBs
NCBI-GeneID: 121544637
NCBI-ProteinID: XP_045065031
LinkDB
Position
29:complement(8942798..8998329)
AA seq 1214 aa
MKKFNIRKVLNGLTASSSSASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYRPSSMAF
DPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVHLW
NLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWNK
AIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSVAW
HHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTRD
GDAFMVMSGGLSYDTGCRRSCLTVIHGKSTAILEMDYPIVDFLTLCETPYPNDFQEPYAV
VVLLEKDLVVIDLGQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQNR
QGYSKKEWPISGGNWGQGTLSYPEIIITGHADGSIKFWDASAIMLQVLYKLKTAKVFEKA
LKGGKEEKPSTEIVDEDPFAIQTLSWCPESRVLCVAGVSAHVIIYRFSKQEMTTEVVQLL
EVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSSSPTQEGEPPEAQPFTSDDGPRDNVPCL
KVRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSSGLVVVDYLQM
ILLLNMGTSELYSPSDPYQRQPRSPRKTRQPSGDLSTVTSCISRLSIFSTSMKKTYYSSN
SPLSDNSDGNNASEEKSNKSPTSGDTSPTSSDDEHKQKRFIEMVKSKSRWFSKMVANDFA
KMSRKMSSPTEQKTGLEERVRRQRSLPYKRCFCCMKEGKASRSLLYVHRTLSVPDVNAKD
SLFSRSRSSSVTSIERESREAISSFHFSESFPRKTDSNPSPSLWVGTTQGTVLVLSLSLP
PTGDQRLQQPVGVSSCGTLVRLKGGILTMAFLDSLGAVLPPSYEPWSEPNAPDEEKEARS
RRPASPPPTQEGQDSQYAVVCSEKQAKVVGLPSQSCFFKHNITESSFVLRADVVQMAAGL
CLACFCANGHVMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRIT
YSQETCDNLQEMMGELFTPLETPEAPNRGFFKGLFGGGAQSLDREDLFGETAAGKGSRSL
AQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKLGELEDRTAAMMASADSFSKHAH
DMMLKYKDKKWYQL
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgaagaagttcaatatcagaaaagtgctaaacggcttgactgcttcgtcttcctctgca
tctccacaaccgggaactaatcaaaacgatgtgatccaagagacgctacaatcggagcat
tttcagctctgcaagactgtgcgccatggcttcccctaccggccctcctccatggccttt
gaccctgtgcagaaaattctggccatcgggactcagagtggagctgtgagactttttggc
cgtgcgggtgtggagtgttactgtcagcatgacagtggtgcagctgtcatccagctccag
ttcctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcacctgtgg
aacctgaggcagaagcagccagctatcctgcacactctcaaattcaacagggagaggatc
acgttttgtcacctgcccttccagagtaaatggctgtacatcggaacagagaaaggaaac
atccacatcgtcaacgttgagtctttcacactctcaggctacgtcattatgtggaacaaa
gccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataacccc
atggacgagggaaagattttgattggatttgaatgtgggactgtggtgttgtgggacctg
aaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactcagtagcctgg
caccatgagggaaaacagttcacctgcagccactcagatggaactctgaccacatggaat
gtacgggtccccgccaagcctacaatcaccatcacaccacacggtaagcagcccaaggat
ggaaagaagccagaaccatgcaaacctatcctcaaagtggagtataaaacgactagagat
ggggacgccttcatggtcatgtctggaggcctgtcctatgacacggggtgcaggaggtcc
tgtctgacggtgatacatgggaagagtactgccatcctggagatggactatcccatcgta
gacttcctcacgctctgcgaaacaccttatcctaatgatttccaggagccttatgctgta
gttgtcctcttggaaaaggatttagttgtcatcgaccttggacaaattgggtacccaata
tttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggagtacttc
gctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaaaacaga
cagggttacagtaagaaggaatggcctataagtggtggtaactggggtcaaggcacactg
agctaccctgagatcatcatcactggacatgctgatggatcaatcaagttttgggacgct
tctgcaataatgctccaagtactgtacaaactgaagactgccaaggtgtttgagaaggct
ctaaagggcggtaaggaggagaagccgagcacagagatagtggatgaggatccctttgcc
atccagaccttgtcgtggtgcccagagagcagagtgctgtgtgtggccggagtctccgcc
cacgtcatcatctataggttcagcaaacaggaaatgaccacagaggtggtgcagctgttg
gaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcaggagaccat
cctcccaccccctctaccccagtacccccctcctcctccagccccacccaggagggagag
ccccctgaggcccagcccttcacctctgatgacgggcccagagataacgtaccatgcctc
aaggtccggagctcccctctgaagcagtctcctgggtaccaggtggagctggtcattcag
ctggtctgggttagtggggagccgcctcagcagatcaccagcctggccgtcaactcctca
tatggacttgtggtgtttggcaacagcagcgggctggttgtagtggactaccttcagatg
atcctcctcctgaacatgggcacgtcagaactgtacagtccctcagacccctaccagaga
cagcctcggtcgcctcgcaagacacgacagccatctggggacctttccactgtgacgtct
tgcatttcccgcctttctatcttttctacgtctatgaaaaagacctattattcttctaac
tcccctctcagtgataacagcgatggaaacaacgcttcagaggagaaaagcaacaagtca
ccaacgtcaggcgatacgtcacccaccagttcagacgatgaacacaaacagaaaaggttt
atagagatggtgaagtccaaaagcaggtggttttccaagatggttgccaatgactttgcc
aagatgtcaaggaaaatgagctcgcctacagagcaaaagacaggcctggaggagagggtg
cgacggcagcgctctctcccatataagaggtgcttttgttgtatgaaggagggcaaggcg
tccaggagccttctctacgttcataggactctctcggtccctgacgtcaatgccaaggac
agtttgttcagccgctcgaggagttccagtgtgaccagtatagagcgggagtcccgtgaa
gctatctcctccttccacttcagtgagagtttccccaggaagacagacagcaaccccagc
cccagcctgtgggtgggtactacccagggcactgtcctcgtcctctccctcagtctgcca
cccacaggggaccagaggctgcagcaacctgtcggagtctcgtcctgtggtactctggtc
agactaaaaggaggtatcctgactatggccttcctggactcccttggggcggtccttcct
ccttcctacgagccgtggtccgagcccaacgctccagacgaggagaaggaggcgaggagc
cgccggccggcctccccaccccccacccaggagggtcaggacagccagtacgctgtggtg
tgctcagagaaacaggccaaggtggtgggcctgccttcccagtcctgcttcttcaagcac
aacatcacagagagctccttcgtgctgagagctgacgtggtgcagatggctgctggactc
tgcctcgcctgcttctgtgctaatggacacgtcatgactctgagtctacccagtctcaga
ccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggaccttctgc
ttctccaacctgggccaggctctgtacctcacctcccccactgagatacagaggatcaca
tacagccaggagacctgcgacaatctacaggagatgatgggagagctgtttacaccgtta
gagacacctgaggcccctaatagaggtttcttcaagggcctgtttgggggaggagctcag
tcgctggatagagaagatctgtttggtgagactgcggcgggtaagggatctcgtagcctg
gcgcagcacatccctgggccccagggcatggagggcatgaagggggcagcctcgggggtg
gtgggggacctggcccgcgcccggatagccctggacgagagggggcagaaactgggcgag
ctggaggacagaaccgcagccatgatggccagcgctgactccttctctaaacacgctcat
gatatgatgctgaagtacaaagataagaagtggtaccagctctga

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