Coregonus clupeaformis (lake whitefish): 121544666
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Entry
121544666 CDS
T08357
Name
(RefSeq) spectrin beta chain, erythrocytic-like
KO
K27409
spectrin beta, erythrocytic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121544666
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121544666
Intermediate filaments
Intermediate filament-binding proteins
121544666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DUF4600
Ribonuc_L-PSP
DYH2-5-8_CC
Spectrin_6
Motif
Other DBs
NCBI-GeneID:
121544666
NCBI-ProteinID:
XP_041710637
LinkDB
All DBs
Position
29:11412481..11486098
Genome browser
AA seq
2370 aa
AA seq
DB search
MTSTTDFDNAEITQQYSRINTRFELLGEDLDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILSRVSCRISDLYLDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQGDGTQRESRTAK
DALLLWCQMKTAGYPNVNITNFTTSWKDGMAFNALIHKHRPDLVDYSGLKRSNPTHNLQN
AFNVAEQTLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSMMKALAVEGKRVGKVLDH
AIETEKMIDKYETLSSDLLTWIKQTIIVLNNRKLANSLTGVQQQLLAFNSYRIVEKPPKF
QEKGNLEVLLFTIHSRMRANNQRVYTPKEGALVADLNRAWEHLERAEHERERVLRDELIR
QEKLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEE
RIQGVVAISKELESERFHDAKRIDVRKDNILRLWDYLQELLKARRARLDKNLTLQRIFQE
MLYIINWMDGMKARLLSPDFGKHLLEVDDLLQKHALVEADISVQAERVHNANAAALKFAN
GDSYKPCDPQVIKDRVQHLDLCYQELCALAAQRRARLEQSRRLWNFFWEMAELESWIKEK
EHIFSSLDYGKDLTSVLVLQSKHSAFEDELGARRAHLQEIMDEGDKMIQAGHFGAPQVGD
CMEDVRRQWQQLEELAVFRRQNLQDTQRFFQFQGDAEDLKAGLLDAKRQMTSDDVGHDEY
TTQRLLKRHRDLRDDVAKNGATIDALTKQAAALPEELRNTPDIQRRLKDIRDLYMELMSL
CDLRQKKLDDAMALYTIFSETDSCELWMGQKETWLVGLDIPEKLEDLEVVQNRLSILASD
MANVQTRVDDVNKAVKQLEDSRHPCTKEVKECQMRLNKRWQAFKAMVEEKKRKVDSALSY
HNYGLECDETEAWIRDKTRVIKSTQDLGNDLNAVMTIQRKLYGMERDLAAIEDKLTFLRS
EADQLAKDHPDNAADILARKAELDAAWDNLRATLKDQEDSLGEVSKLQTFLQDMDDFQSW
LFKTQKAVASEDMPETLPQAEQLLILHNAVYDDMDVHEEDYHKVRDTGVAVTQGQLEDPQ
YQELDKRLKGLDRGWDELHKMWDSRKGFLDQGLGFQLFMRDAKQVETILNNQEYTLAHTD
KPDTLDGAEQALKKHEDFVCTMNANMEKLAITLEGGQRLVDSGNLYSPRVQDKMDSIHDR
YNKNRGKANEVTGILKDNRNLQHFLQNTQDLTLWINDKMLTAQDVSYDGDRNLHTKWKKH
QAFMAELASNKDWLKKIDQEGQELMDSKPDFEPIVTERLAKLHELWDKLESTAENKARLL
FDANRSELFDQSQADMKKWLAELQKELQGDDEVKDLTNANILLKKHQQIENQVRDRAREL
EDLQEAVQKHGGPAGSREDQPELEAEQQAIQRDFQQLLTPLAQRRGKLEAAKAVHQFYRD
LADEILWVEERLPLAMSDEHGNNLQAVQLLLKKNQTLQREMEGHQPRVDEVLERGRRMAS
AATEEGGPEAERIGEQVKELKEVWARLQEEMAKRRDWLNGSNLAQQYYNDADEAEAWIGE
QELYMITDDKAKDEQSAMLMLKRHLIMKQAVDDYSDSIQKLSDRAQKMLNEDHPDGESII
RRQGQVDKQYAGLKDLAEDRRRKLDHVYHHFLLSREVEDLEQWIAERDIVASSQEMGQDL
DHVTILRDKFRDFARETGTVGQERVDCVNQTIDELIKAGHTEAAAMAEWRDSINESWADL
LELIDTRAQLLQASYDLLKYFDDGKELVAQIQEKRNEIPADLGEDFSKADTFHRMHAAFE
RDISALGKQVQQFQETAARLHAQYAGDQATEIQAQEKEVVEAWKALLDACDGRRKRLEET
ADKFRFFTMVRYLMSWMENIIQQIETQEKPRDVSSVELLMKYHQGIRSEIDQRGPKFSDC
VEHGKALLARKHKDSAEIKEKLIQLMERKKEMMTKWDDRWDWLRLLLEVCQFARDASVAE
AWLVAQEPYVASKDLGQTVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLELRKQ
QQEMQQFVTEEQQRSQMESRREDTGFAEDSSQLYTIEEQTLSASGAVEVEPSSGQLEGTA
GDSTVPMVSEMQDAGLQEAGSLELLDASVSGQTPREGEPRAATLPADPLSPKAVLQKGML
GRKHDLEAAGKKASNRSWNNLYCVLKPGQLSVYKDAKSFGHGSTYHGEDPLSLCNAIWEV
LTNYKKKKHVFILRLGDGSEYLFQCKDEEELGHWTQAMEKAVKPLAQKEAEPSGSAGARA
RSLPPPSSSTTPEPAKDKEKKGFSRFAKKK
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaccacggactttgacaacgctgagatcactcagcagtacagccgcatcaac
acacgtttcgagctgctaggagaggatctggacaatgacaacagctctgcaagactgttt
gagaggtcacgcatcaaagccctcgcagatgagcgtgaggcagtccagaagaagaccttc
actaaatgggtcaactccatcctgtcccgggtcagctgccggatctctgacctgtacctg
gacctcagggatggacgcatgctcatcaaactactggaggtcctctctggagagaaactg
cccaagcccactaagggtcgtatgcggatccactgcctggagaatgtggacaaggccctg
cagttcctcaaggagcagagggtccacctggagaatatgggatcacacgacatcgtcgac
ggcaaccaccgcctcatcctgggactcatctggaccatcattctcagattccagatccaa
gacattgtggtggagatgggacagggagacgggactcaacgggagagccgcacagccaag
gacgctctgctactctggtgccagatgaagactgccggatatccaaatgtaaacatcacc
aacttcaccaccagttggaaagacggcatggcgttcaacgctctcatacacaaacatagg
ccagacctggtggactatagtggcctgaagaggtccaatccaacccataacctgcagaat
gcattcaatgtagcagagcagacgcttggagtgaccaaactgttagaccctgaagatgtg
ttcacagagaacccagatgagaagtccatcatcacatacgttgtagctttctaccactac
ttctccatgatgaaggcattagcggtggaggggaagagagttggcaaggtactagaccat
gccatagagacagagaagatgattgacaagtacgagaccctgtcgtcagacctgctgaca
tggataaaacagaccatcatcgtcctgaacaaccgtaaactggccaactctctgaccggg
gtccaacagcagctcctagccttcaactcctaccgcatagtggagaaaccacccaagttc
caggagaaaggtaacctggaggtgctgttgttcaccatccacagccgtatgagagccaac
aaccagagagtctatacccccaaggagggggctctagtagctgatctcaacagggcctgg
gagcatttggagcgggcggagcatgagagggaacgtgtcctgagagacgagctgattcgt
caggagaaactggagcagatggccagacgcttcgacaggaaggctgccatgagagagacc
tggctactcgagaaccagagactggtggcacaggacaactttggctacgacctgccggcg
gtagaggccgctaagaagaagcacgacgccattgagacggacatcgctgcctacgaggaa
cgcatccagggcgtagtggccatctctaaagagctggagtctgagcgcttccacgacgcc
aagcgcatcgacgtgcgtaaggacaacatcctgaggctgtgggattacctacaggagctg
ctgaaggctcgcagggcacgcctggacaagaacctcaccctgcagaggatcttccaggaa
atgttatacatcatcaactggatggatgggatgaaggctcggctgctctcccctgacttt
gggaagcacctgttggaggtggatgacctgctccagaagcatgctctggtggaggccgac
atctctgtgcaggcagagagagttcacaatgccaacgctgctgctctcaagtttgccaat
ggagatagctacaagccctgtgacccccaggtgattaaggaccgggtgcagcacctggac
ctatgttaccaggagctgtgtgccctcgcggcccaacgccgcgcccgcctcgagcagtcc
cgacgcctctggaacttcttctgggagatggccgagctggagagctggatcaaggagaaa
gagcacatcttctcctcgctggactacggcaaggacctgaccagtgtgctggtcctgcag
agcaaacatagtgcctttgaggacgagctgggggcccgccgtgcacacctgcaggagatc
atggatgagggtgataagatgatacaggccggacacttcggggcgccccaggttggggat
tgcatggaggacgtgaggcgtcagtggcagcagctggaggaactggcagtgttcagaagg
cagaatctccaggacacccagaggttcttccagttccagggagacgctgaagacctgaag
gccgggctgctggacgccaagaggcagatgactagtgatgacgtgggccatgatgagtat
accacccagagactgctgaagagacacagagacctccgggacgatgtcgctaagaacgga
gccaccatcgatgcactgaccaaacaggcggcggcgctacccgaggagctgcgcaacacg
ccggacatccagagacgtctgaaggacatcagagacctgtacatggagctaatgtccctg
tgcgacctgaggcagaagaagctggatgatgccatggccctctacacaatattcagtgag
acagactcctgcgagctgtggatgggccagaaggagacctggttggtggggctggacata
ccggagaagctagaggatctggaggtggtgcagaacaggttgagtattcttgcttcagat
atggctaatgtccagacgcgtgttgatgatgtcaacaaagcagtgaagcagcttgaggac
agcagacacccttgtaccaaagaggtgaaggaatgccagatgagactgaacaagaggtgg
caggccttcaaggccatggttgaggagaagaagcggaaggtggattcagctctcagctac
cacaactacggactggagtgtgacgagacagaggcctggatcagggacaaaacccgggtc
atcaagtctacccaggacctgggcaacgacctgaacgctgtgatgaccatccagaggaaa
ctctacggcatggagcgggacctggccgccatcgaagacaagctcaccttcctaaggagc
gaggcggaccagctggccaaggaccacccagacaacgctgcagacatcctggctaggaag
gccgagctggacgcagcctgggataacctgagggccaccctgaaggaccaggaggactcc
ctgggagaggtgtccaagctgcagaccttcctacaggacatggatgacttccagtcctgg
ctcttcaagacccagaaggccgtggcatccgaggacatgcctgagacccttccccaggct
gagcagctgctgatcctccacaatgctgtgtatgatgacatggatgttcatgaggaggac
taccacaaggtgagggacacgggcgtggcggtaacccagggccagctggaagaccctcag
taccaggagctggacaagaggctgaagggtctggaccgcggctgggacgagctccacaag
atgtgggacagcaggaagggcttcctggaccagggcctgggcttccagctgttcatgagg
gacgccaagcaggtggagaccatactcaacaaccaggagtatactttggcccacacagac
aagcctgacaccctggatggagccgagcaggccctgaagaagcacgaggactttgtctgc
accatgaacgccaacatggagaagcttgccatcacgctggaggggggacagagattggtg
gacagcgggaacctctactcccccagggtccaagacaagatggactccattcatgacagg
tacaacaagaacagaggcaaagccaacgaggtgacagggatcctcaaggataaccgcaat
cttcaacacttcctgcaaaacactcaggatctgactctgtggataaacgacaagatgttg
actgctcaggatgtgtcgtacgacggggacaggaaccttcacaccaagtggaagaagcat
caggccttcatggctgagctagcctccaacaaagactggctcaagaagatagaccaggag
ggtcaggagctgatggactccaaacctgatttcgagcccatcgtgacggagcgtctggcc
aagctgcatgagctgtgggacaaactggagtccactgccgagaacaaggcccgtctgctg
tttgatgctaaccgctccgagctgtttgaccagagtcaggccgacatgaagaagtggctg
gctgagctgcagaaggaactacagggagacgatgaggtcaaggacctcaccaatgccaac
atcctgctcaaaaagcaccagcaaatagagaaccaggtgcgtgaccgggccagggagctg
gaggacctccaggaggctgtccagaagcacggtggcccagccgggagcagggaggaccag
ccggagctggaggctgagcagcaggccatccagagggacttccagcagctcctcaccccc
ctggcccagcgcaggggcaagctggaggcagccaaggccgtgcaccagttctaccgggac
ctggctgatgagattctctgggtagaggagaggttgccccttgcgatgtcagatgaacat
ggcaacaacctccaggcagtccaattgctgttgaagaagaaccagactttacagagggag
atggagggccaccagccgcgggtggatgaggtgttggagcgtggccggaggatggcatcg
gctgctacagaggagggcgggccggaggcagagcgtattggagagcaggtgaaggagctg
aaggaggtgtgggccaggctacaggaggagatggctaagaggagagactggctgaatgga
tctaacctggcccagcagtattacaacgatgctgacgaggcagaggcctggataggagag
caggaactctacatgattactgatgacaaggccaaggatgagcagagtgccatgttgatg
ttgaagcgtcacctgataatgaagcaggctgtagatgactactcagactccatccagaag
ctgtctgaccgcgctcagaagatgctgaacgaagaccaccctgatggtgaatctataatc
cgtcgtcagggccaggtggataagcagtatgctggtctgaaggacttggcagaggaccgt
aggaggaagctggaccatgtctatcatcacttcctgctgagccgagaggtggaggatctg
gagcaatggattgctgagagggacatagtggcgtcctcacaggagatgggacaggacctg
gaccatgttacaatcctgagggacaagttccgtgactttgcccgggagacagggacggtg
gggcaggaacgagtggactgtgtgaaccagacgatagacgagctgatcaaggcgggccac
acagaggctgctgccatggcagagtggagggacagcatcaacgagagctgggctgacctg
ctggaactcatagacacccgcgctcagctcctacaggcctcctacgacctgctcaagtac
ttcgatgatgggaaggagctggtggctcaaatccaggagaaacgaaatgagattcctgct
gacctaggagaagacttcagcaaggcagataccttccaccgcatgcatgccgccttcgag
agggacatcagtgccctgggaaaacaggtgcagcagttccaggagacagcggcccgtctg
cacgcccagtatgctggggaccaggctacagagatccaggcccaggagaaggaggtggta
gaggcctggaaggctctactggacgcctgcgacggccgcaggaaacgcctggaagagaca
gctgacaagttccgcttcttcaccatggtccgatacctgatgtcctggatggagaacatc
atacagcaaatagagacacaggagaaaccacgggatgtgtcatcagtagagctgctgatg
aagtaccaccaggggatcaggtctgagatcgaccagcgtggaccaaagttctctgactgt
gtggagcacggcaaggctctgctggcacgtaaacacaaagactctgctgagatcaaggag
aaactgatccagctgatggagaggaagaaagagatgatgaccaagtgggacgaccgatgg
gactggctcaggctcttgttggaggtgtgccagtttgcgcgggatgcctcagtggcggag
gcgtggctggtggctcaagagccgtacgtggccagtaaggacctgggacagactgtagac
gaggtggagaaactactgaagagacacgaagccttcgagaagtccaccgctacctgggag
gagcgcttctcagccctggagagacttactacattggagctgttagagttgaggaaacag
cagcaggagatgcagcagtttgtaacagaggagcagcagcgttcacagatggagagcagg
agagaagacacagggtttgcagaggactcctcccagctctacaccatcgaggagcagaca
ctgtctgcctctggagcagtggaggtggagcccagttcgggtcagttggagggaacagcg
ggtgactctacggtgcccatggtctctgagatgcaggatgctggcttgcaggaggctggc
tctctggagctgctggatgcctctgtgtcaggacagacccccagggagggggagccccgg
gccgccaccctgcccgctgaccccctcagccctaaggctgtgctgcagaagggcatgctg
ggacggaaacatgacctagaggctgctgggaagaaggcttccaacaggtcctggaacaac
ctgtactgtgtgctgaagcctggtcagctgtctgtctataaggacgccaagagcttcggc
cacggctccacctaccacggagaggaccctctgtcgctctgcaacgccatatgggaggtc
ctaaccaactacaagaagaagaagcacgtattcatactgaggctgggtgatggtagtgag
tacctgttccagtgtaaagacgaggaggagctggggcattggacccaggccatggagaag
gcagtgaagcccctggcacagaaagaggcagaaccctcagggtccgcaggggcccgggcc
cgcagcctgccccctccttcctcctctaccaccccagagccagcgaaagacaaggagaag
aagggcttcagtcggtttgccaagaaaaagtga
DBGET
integrated database retrieval system
