Coregonus clupeaformis (lake whitefish): 121544692
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Entry
121544692 CDS
T08357
Name
(RefSeq) F-box only protein 34
KO
K10311
F-box protein 34
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121544692
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121544692
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
121544692
NCBI-ProteinID:
XP_041710695
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Position
29:10214936..10245128
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AA seq
868 aa
AA seq
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MPERCESMSYCSATAASHREPRKPPPPNLLQSAWRVAAMHLKQYPKLQKKELHLESSQDS
QRGLHHVSQQGVLSQRTVGGVRRVGPSSSGLGQGTACYPLSVISTNTLQCCSNDNSGSNH
HNNSNNIHVNRGSGCGLQTSRLSESEGDVFHSSASKTTTCNTPSSLLLLSTSSCTTTSTG
SVGSEDQEASLSISYEGEDREGPLEIWAVIKPGNTKEKIAIFASPQCRGSLVNGGGGEPV
REAGEDFVSSSLGRTVSVKMKSCWEDEGGSVAKRRRRSGHQGQHKDRDRQSSRALETQSP
LSPTENSPVEVTICLGESPRVPECGEVVVRVGGEQVCRVEGEEGSETGTGKALSVVELVA
FLEQRASDKQVDSKPVSLRSSTSITLSRGLSLTQEPQQPRAPDQSPQGTGEEAECVKVSD
MVAKLESECLKHQNVTREGSRSGGELSRNNSLSRNNSLSRNNSLRRRVGRVLLAGADAFS
ISAQPPPPQSPTEPHHGLEETTRVQHRHASPSTGYPSTGTSHTDKLVPSSCREAAQLASS
TSDSGSPSHSVDSGCGASVVREPEESCEAQGLGQGQQKNRAVEAGQDLHFQLQSEQARAS
RTDSSCKLQCKEPLPGMLFFSHPLPSQAVLEHTLPHTDNTHTPTPQDMESSPKPTRDSAE
PSKTQPCDPAITSLLSEPISHSENWAEEEEAVSEGEGSAVSRCETVPFPLRRMVSHEFLE
MRFKIQLLLEPQQYMAFLPHHIIIKIFCLLPTESLAVLKCTCHYFKFIIESYGVRPADSR
WVCDPRYKDDPCKQCKKRYGRGDVSLCRWHHKPYCQALPYGPGYWMCCHGSHKDTPGCNV
GLHDNRWVPAFHSINMPIYKKPREVSEE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagagatgtgaatctatgagttactgcagcgctactgccgcctctcacagggaa
cctaggaaaccaccaccacccaacctgctgcagtcagcctggagggttgcagccatgcat
ctcaagcaataccccaaactgcagaagaaagagctccacctggagtccagtcaagacagc
cagagaggccttcatcatgtgagccagcagggtgttctgtcgcagaggacagtggggggg
gtccgccgggtgggcccgtctagcagcgggcttggccagggtacggcctgctaccccctc
agtgtcatatccaccaacaccctgcagtgctgcagtaacgacaacagcggctccaaccac
cacaacaacagtaataatatccacgtcaaccgtggtagtggctgtgggctgcagacctcg
aggctgagtgagtccgaaggggatgtattccacagtagcgcctccaagaccaccacctgc
aacaccccctcctccctgctactcctctccacctcctcctgcaccaccacctctacaggc
tcggtgggctctgaggaccaggaggcctccctcagcatctcctatgaaggggaggacaga
gagggaccgctggaaatctgggccgtcatcaagcccggcaacaccaaggagaagatcgca
atcttcgcttcgccccagtgccgtggcagcctggtgaacggtggcggtggagagccggtc
agggaggccggtgaggactttgtgagcagcagcctggggaggacagtgtctgtgaagatg
aagagctgctgggaggacgagggtggctctgtggccaagcgcaggaggaggtcagggcat
caggggcaacacaaggaccgagacagacagtcatccagagccctggagacacagagccca
ctgagccccactgagaacagccctgtagaggtgaccatctgcctcggagagagccccaga
gtgcctgagtgtggggaggtggttgtaagggtgggtggggagcaggtgtgtagggtagag
ggcgaggaggggagtgagactgggacgggcaaggctctctctgtggtggagttggtggcc
ttcttggagcagagagctagcgacaagcaagtggactctaagcctgtgtctctgcggagc
tccactagcattaccttatccagggggctgtcactgacccaagagccccagcaacccaga
gccccagaccagagcccccaggggacaggtgaggaagcagagtgtgtaaaggtgtcagac
atggtggccaagctggagtccgagtgcctgaagcaccagaatgttacaagggaagggtcc
agatctgggggagagctctcgcgcaacaacagcctctcgcgcaacaacagcctctcgcgc
aacaacagcctgcggaggagggtgggccgggttctactggcaggagcagacgccttctcc
atctcagcccagcctcctccacctcagtctcccaccgagccccaccatggactagaggag
acgaccagggtgcagcaccgccacgctagtccctctactggctatccctctactggcacc
agccacacggacaaactagttcccagcagctgccgtgaagctgcccagttggcttctagc
acctctgactcaggctctccgtctcacagcgtggactctgggtgtggcgcctccgtcgtc
agagagccggaggagagctgtgaggcccagggcctggggcaggggcagcagaagaacagg
gctgtagaggctgggcaggacctgcacttccagctccagtcagagcaggccagggccagc
aggacagacagtagttgtaaactacagtgtaaggagcccctcccaggcatgctgttcttc
tcacaccctctgccctcacaggcggtgcttgaacacacactgccacacacagacaatacc
cacacccccaccccccaggacatggagtccagccctaaacccacaagagactcagcggaa
ccctccaagactcagccctgcgaccccgctatcacctccctcctttctgaacccatatct
cacagtgagaactgggctgaggaggaagaggcggtgagtgagggagaggggagtgctgtt
agccggtgtgagactgtgcctttccccctgcgccgcatggtgtctcacgagttcctggag
atgcgctttaagatccagctgctcctggaaccccagcagtacatggccttcctgcctcac
cacatcatcatcaaaatcttctgcctgctgcccacggagagcctggccgtgctcaagtgc
acctgccactatttcaagttcatcatcgagagctacggcgttcgacccgcagactcccgc
tgggtgtgcgacccccgctacaaagacgatccctgcaagcagtgtaaaaagcggtacggg
cgtggagacgtgtccctctgccgctggcaccacaagccctactgccaggcgctgccctac
ggccccgggtactggatgtgttgccacggctcccacaaagacacgcccggctgcaatgtc
ggtctccatgacaaccgctgggtgcccgccttccatagtatcaacatgccaatctataag
aaacctagggaggtctctgaggagtag
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