Coregonus clupeaformis (lake whitefish): 121544705
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Entry
121544705 CDS
T08357
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121544705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544705
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121544705
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121544705
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121544705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
AceES-2
Motif
Other DBs
NCBI-GeneID:
121544705
NCBI-ProteinID:
XP_041710715
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All DBs
Position
29:18158246..18168787
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AA seq
407 aa
AA seq
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MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGKN
KREKMEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKSDRMIRSHK
SAADDINRIASTLYTLGTQDSTDVCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRGRALVDYENANKALDRARAKNKDVLQAETSQQVCCQKFEKISESAK
QELIDFKTRRVAAFRKNLVELSELELKHAKGNLQLLQSCLGVLKGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagggctggacgatggtcccgatttcctctccgaggaggacagaggacct
agggcagtcaatgttgacctccaaactgatgcaacacttcaagtggacatttctgatgca
ttaagtgagcgggacaaggttaagtttactgtccatactaagagcactcttcctaacttc
aagcagaatgagttttcagtggtgaggcagcatgaggagttcatctggctccatgactct
tttgtggagaatgaggaatatgcaggctacattattcccccagccccaccaagacctgac
tttgatgcctccagagagaagttacagaaactaggggaaggtgaaggttccatgaccaag
gaagagttcaccaaaatgaaacaggaacttgaagccgaatacttggctatcttcaagaag
actgtggcgatgcatgaagtgtttctttgccgtgtggctgcgcatcctgtcttgaggaaa
gacctgaacttccatgtatttttagagtacaaccaagacctgagtgtacgaggcaaaaac
aagagggagaagatggaagatttcttcaagaatgtggtgaagtctgcagacggtgtgtta
gtggcaggggtgaaggatgtagatgatttctttgagcatgagaagacattccttttagaa
taccataatcgtgtcaaagatgcctccgccaaatctgatagaatgatcaggtctcacaaa
agtgctgcagatgatatcaatagaattgcctccacactgtacactttaggaacccaggac
tccacagatgtgtgcaaatttttcttgaaagtctctgaactgtttgagaaaacacggaaa
atagaggctcgagtggctgcggatgaggacctgaaacttgcagacttactgaagtattac
ctcagggagtcgcaagctgcgaaggatctattgtacagacgagggagggccctggttgat
tatgagaacgcaaacaaagctctggacagagccagggcaaagaacaaagatgtgcttcag
gcagagaccagccagcaggtgtgctgtcagaagtttgagaaaatctcagagtctgcaaag
caagagctcatagacttcaagacaagacgagtagcagccttcagaaagaacttggtggaa
ctttctgaactggaactcaaacatgctaagggtaatttacaattattgcaaagctgtctc
ggagtcctcaaaggagacacttag
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