Coregonus clupeaformis (lake whitefish): 121544718
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Entry
121544718 CDS
T08357
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544718
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121544718
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121544718
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
121544718
NCBI-ProteinID:
XP_041710743
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Position
29:complement(16147884..16164208)
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AA seq
634 aa
AA seq
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MAASVRGKQAAALKRMLNFNAPQLKNTAAEPVWKVLIYDRCGQDIISPLLAVKELREMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRSQLYESYYLNFISAISRSKLEDI
ASAALSANAITQVTKVFDQYLNFITLEDDMFILSNQNKELISYHAINKPDIMDTEMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGAGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSMDESVGSEASPAGARPK
KKNKKSYDLTAADMFWLKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISSISMSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKL
MSKSTLDKSLLDIISDPDAGTPEDKMRLFLIFYITALQPTSETDLDQYKKALLDTGCDLS
PVNYIKQWKAFTKIAATPSNYGNSGVKPMGLFSRVMNSGSQFVMEGVKNLVLKQHNLPVT
RILDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYTKAKPGKRVLYGCSELFNAGQFIKQLSSLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccgtccggggaaagcaggcagctgccttgaagcgcatgctgaatttcaac
gctcctcagttgaaaaacactgctgctgagccggtatggaaggtgctgatctacgacagg
tgtggccaggacatcatctcccctctgctggcagtcaaagagctacgggaaatggggatc
actttgcacttgttgcttcattcagacagagatcccatcccggatgtgccagccatctat
tttgtaatgccgacagaggagaacattgaccggatatgccaagaccttcgtagtcagctg
tatgagtcctactatttgaacttcatctcagccatatccagaagtaaactagaggatatt
gccagtgcagctctctcagccaacgctatcacacaggttaccaaggtgttcgatcagtat
ttgaacttcatcacacttgaagatgatatgttcatcctcagcaatcaaaataaagagctc
atctcctaccatgcaattaacaaaccggacatcatggacacagagatggaggccatcatg
gatacgatagtagacagtctcttctgcttctttgtcactctgggtgctgtccccataatc
cgctgtccaagagggaatgctgcggagatggtcgcggtgaaacttgacaagaagcttcgg
gagaacctgcgagacgccagaaacagcctgttcactggagacaacatgggggccggccag
ttcagcttccagagacccctatttgtacttgctgaccgcaacctggatcttgccaccccc
ctccaccacacatggacctatcaggccctcatccacgacgtgctggacttccacctgaac
agggtcagtatggatgagtctgtggggtcagaagcctcccctgccggagccagacccaag
aagaagaacaagaagagttatgacctcacagcagccgacatgttctggctgaaacacaag
ggcagcccgttcccggaggtggctgagtctgtacaggaggagttagacacgtaccgagcc
caagaggacgaggtgaaacgcctcaagagcatcatggggttggagggtgaggatgaggga
gccattagtagtattagtatgtcagacaacactgcaaaacttacctcagctgtcagctcc
ctaccagagcttctggagaagaagaggctgattgacctccacactaacgtagccaccgcc
gttctggatcacattaagagccgtaaactggacgtgtactttgagtacgaggagaagctg
atgagtaaatccaccctggataagtctttactggacatcatcagtgacccagacgctgga
acaccagaggacaagatgagactctttctgatattctacatcacagccctgcagcccact
tcagagactgatctggaccaatacaagaaggctctgctagacacaggctgtgacctgtcc
cctgtcaactacatcaagcagtggaaggctttcactaagattgctgccacaccatctaac
tatgggaacagcggtgtaaaacctatgggcctcttctctcgagtgatgaactctggctcc
cagtttgtcatggagggggtgaagaacctggtgctcaaacagcataacctgcccgtcacg
cgtatcctggacaacctgatggagatgaagtccaacccggagactgatgactacagatac
tttgatcccaagatgctgcgtggcagtgagagctccatcccaaggaacaagaacccgttt
caagaggctattgtcttcgtggtaggaggagggaactacatagaatatcaaaacctggtg
gactacacaaaggcaaagccagggaagagggtgctgtacggatgcagtgagctcttcaat
gcaggacagttcatcaaacagctgtcttcacttggccaaaagtaa
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