Coregonus clupeaformis (lake whitefish): 121544722
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Entry
121544722 CDS
T08357
Name
(RefSeq) EH domain-containing protein 4-like
KO
K12477
EH domain-containing protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121544722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121544722
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121544722
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121544722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_7
EF-hand_1
GTP_EFTU
AAA_16
AAA_22
TsaE
Motif
Other DBs
NCBI-GeneID:
121544722
NCBI-ProteinID:
XP_041710746
LinkDB
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Position
29:complement(12437312..12464140)
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AA seq
546 aa
AA seq
DB search
MFSWVNKEQGGRNKDGEMYQTVTEGLEQLYTKKVFPLEETYLFHDFHSPALEAADFQSKP
MVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDGFIAVMYGENEGVVPGNALVVDPK
KPFRKLNAFGNSFLNRLICSQMPNQVLQGISIIDTPGILSGEKQRISRGYDFSEVLRWFG
ERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDSQQLMRVYGALMWS
LGKVINTPEVVRVYLGSFWAKPLQNTENRRLFEAETQDLFKDIQGLPRNAALRKLNDLIK
RARLAKVHAYIISYLKKEMPSLFGKEKKKEELIMRLPEIYTILQREHHISPGDFPNVVKM
QEQLQHYDFSKFPSLKMKLIESVDKMLANKISGLMTMIRDEESKAPPAMVSGGAFEGSQD
GPFGQGYGEGISAGSDCEDWIVSRDKHKYDEIFYSMNPINGKISGVNAKKEMMSSSLPNT
VLGKIWKLADCDKDGMLDDEEFALAQHLIKVKLEGYELPTELPHHLVPPAHRKDKVADIL
YNHDED
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttgggtgaataaagaacaaggaggcagaaacaaggacggcgagatgtaccaa
actgtgacggagggtcttgaacaactttacacaaaaaaagtatttccattggaagaaacc
tatcttttccatgatttccactcaccggcgttggaggcagcggattttcagagcaagcca
atggttctactggttggacagtattctacggggaagacgacgttcataaggtacctgctg
gagcaggacttcccaggcatgcggattggcccagagcccacgacagatggcttcatcgct
gtcatgtacggggagaacgagggcgttgtccctggcaacgctctggtggtcgaccccaag
aaacccttccgtaaactcaacgcctttggaaactctttcctcaacaggttaatctgctcc
cagatgcctaaccaggtcctccagggcattagtataattgacacaccaggaatcctgtct
ggagagaagcaacgcattagccgaggctatgatttctctgaggtgctgcgatggttcgga
gagcgggtggaccgcatcatcctcctcttcgacgcccacaaactggacatctcagacgag
ttctccgaggccatcaaggccttccgtggccaggacgacaagatccgcgtggtgctgaac
aaggctgaccaggtggacagccagcagcttatgagggtctacggagctctgatgtggtcc
ctggggaaagtcatcaacacacccgaggtggtgagggtctacctaggctcgttctgggcc
aagcccctgcagaacacggagaaccggaggctctttgaggcagagacccaagacctcttc
aaggacatccagggcctgccccggaacgctgccttacgcaaactcaatgacctcatcaaa
cgggctcgacttgctaaggtgcatgcctacatcatcagctacctgaagaaagagatgccg
tcgttgtttgggaaggagaagaagaaagaggaactgatcatgagacttcctgagatctac
accatactgcagagagaacaccacatctcccctggagactttcccaatgtcgtcaagatg
caggagcagctccagcactatgacttcagcaagttcccctccctgaagatgaagctgatc
gagtctgtggacaagatgttggctaacaagatctctggcctgatgaccatgatccgagac
gaggagagcaaggcacccccagccatggtgagcggcggggcctttgagggctcccaagac
gggccctttggccagggttacggagagggcatcagcgccgggtctgactgcgaggactgg
atcgtgagccgtgacaaacacaagtacgatgagattttctactccatgaatcccatcaac
gggaagatcagtggagtcaacgccaagaaggagatgatgagctccagtctgcccaacaca
gtcctggggaagatctggaagctggcagactgtgataaagacggcatgctggatgacgag
gagtttgccctggcgcagcacctgatcaaggtgaagctggaggggtacgagctgcccacc
gagctacctcaccacctggtgcctcccgcccacaggaaggacaaggtcgctgacatcctc
tacaaccacgacgaggactaa
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