Coregonus clupeaformis (lake whitefish): 121544736
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Entry
121544736 CDS
T08357
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121544736
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121544736
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
121544736
NCBI-ProteinID:
XP_041710779
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All DBs
Position
29:complement(13357269..13406031)
Genome browser
AA seq
791 aa
AA seq
DB search
MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFTPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLATLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQILATSGIMNPPSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVVLRCKARGDPEPAIHWISPEGKLVANSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSTDK
QVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVTPSVSKQAMGGSEGGG
GGCLKAAGHATDTLTHSSETSLPDCSTATSLVTQSWNTPGSSGSLKPKRKPAPKPYTAAA
ATPEPKIEALPNAETHNTNRNNSTALQQPSAPVFHSPLPSSRVKDTPILRRAHPRPSSKY
LTLPVEGVRAKRRYSLNEDLSKHHCYIGTTQFRNMWSKRSMSMNGILLQQEDIDSGKATF
SSSEWILESTV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaacctcgcaaccctctgtgccaaaaaa
gggctcctctttacccccccgaacattgacaggcacaccgtggagctgcggctggccgac
aacttcgtcaccagcatcaaaaggaaagactttgccaacatgaccaggctgcaggacctc
accctgtccaggaataccattagcttcatcacgccgcacgcgttcgctgacctggagaac
ctccgcgccttgcacctgaatagcaaccgtctgacccggatagccaatgacaccttcagc
ggcatgtccaaactgcaccacctgatccttaacaacaaccagctgacgttgatccacctg
ggggccttcaatgacctgctggccctggaggagctggatctgtcctacaacaacctggag
tccatcccctgggaggctatccaaaggatgaccagccttgccaccctcagcctggaccac
aacatgatcgactacattcctgaggggaccttctctcttctccaaaagctcaaccgcttg
gacgtaacctctaataagttacagaagctccctcctgatcctctgttccagcgggcccag
attttggccacgtctgggatcatgaaccctccctcgttcgcgctgagctttggtggaaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagccgagaggatgatctg
gagacgtgcgcctcaccgcagcatctctccggacgctacttctggtctatccctgaggag
gagttcctgtgtgaacctcctctcatcacccggcactcccatgagatgcgggtgctggaa
gggcagagggtggtcctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctccccagaggggaagctggtggcgaactcctcccggacgcttgtgtacaccaacggc
accctggacattctgatcagcacagtgaaggacacgggatccttcacctgtatctcgtcc
aacccagcgggtgaggcacatcagactgtggagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcctctgacatctccacgtcc
accagggctggggccaacggcagcaaccacactggggacaccaaaactagcacagataaa
caggtggtcatcgctgaggccacgtcctccactgcgctcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctc
gtttacagaatgattccccccacaagcaaaaacttcctagtcaacaacctggctgctggg
acgtcgtacgacctgtgtgttctggccatctacgacgacggtatcacctccctcactgcc
acccgtgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctacaaggtctgcaacaccagtgac
tcgggcaaaggcacccttgtcaccaatgtccactcacagaccaacggggcgcagtctcag
gggtgcaccgtcacaccctctgtgtccaagcaggccatgggagggtcagagggagggggt
ggagggtgtctaaaggccgctgggcatgcgacggacacgctaacgcactcgtccgagacc
tctctcccagactgctccactgctacgtccctggtgacccagagctggaacacacctgga
tcctcagggtctctgaagccaaagcgcaagcctgcaccaaagccctacactgctgctgct
gccacccctgagcccaagatagaggccctccccaatgctgagacccacaacaccaaccgc
aacaactccacggctctgcagcagccctccgccccagtattccactcccccctaccctcc
tcgcgcgtcaaggacacccccatattgagacgcgcacaccccagaccctcctccaagtac
ctgaccttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgaggacttg
tccaagcaccactgctacattgggacaacacaatttaggaatatgtggtctaagcggagt
atgtccatgaacgggattctacttcaacaggaagatatagacagtggcaaggccaccttt
tccagttcagagtggattctagaaagcactgtgtga
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